3R6N
Crystal structure of a rigid four spectrin repeat fragment of the human desmoplakin plakin domain
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Spectrin repeat | 8004070 | 4000370 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Spectrin repeat | 8004071 | 4000370 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Spectrin repeat | 8004072 | 4000370 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Spectrin repeat | 8004073 | 4000370 | SCOP2 (2022-06-29) |
A | SCOP2 Family | SH3-domain | 8004076 | 4000369 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Spectrin repeat | 8091356 | 3000156 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Spectrin repeat | 8004074 | 3000156 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Spectrin repeat | 8091357 | 3000156 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Spectrin repeat | 8091358 | 3000156 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | SH3-domain | 8004077 | 3000153 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Spectrin repeat | 8091356 | 3000156 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Spectrin repeat | 8091357 | 3000156 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | SH3-domain | 8004077 | 3000153 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Spectrin repeat | 8004074 | 3000156 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Spectrin repeat | 8091357 | 3000156 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Spectrin repeat | 8091358 | 3000156 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | KOG0516_2nd | e3r6nA4 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: KOG0516_2nd | ECOD (1.6) |
A | KOG0516_3rd | e3r6nA5 | A: alpha bundles | X: STAT-like | H: t-snare proteins (From Topology) | T: t-snare proteins | F: KOG0516_3rd | ECOD (1.6) |
A | Spectrin | e3r6nA2 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat (From Topology) | T: Spectrin repeat | F: Spectrin | ECOD (1.6) |
A | KOG0516_1st | e3r6nA3 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat (From Topology) | T: Spectrin repeat | F: KOG0516_1st | ECOD (1.6) |
B | KOG0516_2nd | e3r6nB1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: KOG0516_2nd | ECOD (1.6) |
B | KOG0516_3rd | e3r6nB2 | A: alpha bundles | X: STAT-like | H: t-snare proteins (From Topology) | T: t-snare proteins | F: KOG0516_3rd | ECOD (1.6) |
B | Spectrin | e3r6nB3 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat (From Topology) | T: Spectrin repeat | F: Spectrin | ECOD (1.6) |
B | KOG0516_1st | e3r6nB5 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat (From Topology) | T: Spectrin repeat | F: KOG0516_1st | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.58.60 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
A | 1.20.58.1060 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
A | 2.30.30.40 | Mainly Beta | Roll | SH3 type barrels. | SH3 Domains | CATH (4.3.0) |
B | 1.20.58.60 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
B | 1.20.58.1060 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
B | 2.30.30.40 | Mainly Beta | Roll | SH3 type barrels. | SH3 Domains | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18373 | Spectrin like domain (Spectrin_2) | Spectrin like domain | Desmoplakin (DP) is an integral part of desmosomes, where it links desmosomal cadherins to the intermediate filaments. The N-terminal region of DP contains a plakin domain common to members of the plakin family. Plakin domains contain multiple copies ... | Domain | |
PF17902 | SH3 domain (SH3_10) | SH3 domain | This entry represents an SH3 domain. | Domain | |
PF21019 | Spectrin-like repeat (Spectrin_3) | Spectrin-like repeat | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR041615 | Desmoplakin, SH3 domain | Domain | |
IPR043197 | Plakin | Family | |
IPR001101 | Plectin repeat | Repeat | |
IPR035915 | Plakin repeat superfamily | Homologous Superfamily | |
IPR001452 | SH3 domain | Domain | |
IPR018159 | Spectrin/alpha-actinin | Repeat | |
IPR041573 | Desmoplakin, spectrin-like domain | Domain |