Annotations: 3ON0

Crystal structure of the pED208 TraM-sbmA complex

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	IHF-like DNA-binding proteins	8073275	3000426	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	IHF-like DNA-binding proteins	8073275	3000426	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	IHF-like DNA-binding proteins	8073275	3000426	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	IHF-like DNA-binding proteins	8073275	3000426	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D		e3on0D3	A: alpha arrays	X: Fusion glycoprotein F2	H: Fusion glycoprotein F2	T: Fusion glycoprotein F2	F:	ECOD (v295.2)
C	PQQ_2	e3on0C1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: PQQ_2	ECOD (v295.2)
B	PQQ_2	e3on0B1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: PQQ_2	ECOD (v295.2)
A	Rubrerythrin	e3on0A1	A: alpha arrays	X: Thioredoxin-like	H: Thioredoxin-like	T: Thioredoxin-like	F: Rubrerythrin	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	1.10.10.450	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	TraM protein, DNA-binding	CATH (4.3.0)
D	1.10.287.2320	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
C	1.10.10.450	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	TraM protein, DNA-binding	CATH (4.3.0)
C	1.10.287.2320	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
B	1.10.10.450	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	TraM protein, DNA-binding	CATH (4.3.0)
B	1.10.287.2320	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
A	1.10.10.450	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	TraM protein, DNA-binding	CATH (utative)
A	1.10.287.2320	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E [auth P]	sbmA	-	-	-
A, B, C, D	Protein traM	DNA binding binding nucleic acid binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR010992	Integration host factor (IHF)-like DNA-binding domain superfamily	Homologous Superfamily
A, B, C, D	IPR042073	TraM, DNA-binding domain	Homologous Superfamily
A, B, C, D	IPR007925	Relaxosome protein TraM	Family