3N99 | pdb_00003n99

Crystal structure of TM1086

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z [auth g]	MreC	e3n99g1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
Y [auth e]	MreC	e3n99e1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
X [auth d]	MreC	e3n99d1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
W [auth c]	MreC	e3n99c1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
V [auth b]	MreC	e3n99b1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
U [auth a]	MreC	e3n99a1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
T [auth X]	MreC	e3n99X1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
S [auth V]	MreC	e3n99V1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
R [auth U]	MreC	e3n99U1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
Q [auth T]	MreC	e3n99T1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
P [auth S]	MreC	e3n99S1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
O [auth P]	MreC	e3n99P1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
N [auth O]	MreC	e3n99O1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
M [auth N]	MreC	e3n99N1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
L [auth M]	MreC	e3n99M1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
K [auth L]	MreC	e3n99L1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
J [auth K]	MreC	e3n99K1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
I [auth J]	MreC	e3n99J1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
H [auth I]	MreC	e3n99I1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
G [auth H]	MreC	e3n99H1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
F [auth G]	MreC	e3n99G1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
E	MreC	e3n99E1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
DA [auth k]	MreC	e3n99k1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
D	MreC	e3n99D1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
CA [auth j]	MreC	e3n99j1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
C	MreC	e3n99C1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
BA [auth i]	MreC	e3n99i1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
B	MreC	e3n99B1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
AA [auth h]	MreC	e3n99h1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.1)
A	DUF4438	e3n99A1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: RIFT-related	T: Alanine racemase-C	F: DUF4438	ECOD (v294.1)
A	C1-set	e3n99A2	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
Z [auth g]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
Z [auth g]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
Z [auth g]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
Y [auth e]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
Y [auth e]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
Y [auth e]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
X [auth d]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
X [auth d]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
X [auth d]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
W [auth c]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
W [auth c]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
W [auth c]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
V [auth b]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
V [auth b]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
V [auth b]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
U [auth a]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
U [auth a]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
U [auth a]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
T [auth X]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
T [auth X]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
T [auth X]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
S [auth V]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
S [auth V]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
S [auth V]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
R [auth U]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
R [auth U]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
R [auth U]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
Q [auth T]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
Q [auth T]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
Q [auth T]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
P [auth S]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
P [auth S]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
P [auth S]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
O [auth P]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
O [auth P]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
O [auth P]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
N [auth O]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
N [auth O]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
N [auth O]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
M [auth N]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
M [auth N]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
M [auth N]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
L [auth M]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
L [auth M]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
L [auth M]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
K [auth L]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
K [auth L]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
K [auth L]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
J [auth K]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
J [auth K]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
J [auth K]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
I [auth J]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
I [auth J]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
I [auth J]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
H [auth I]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
H [auth I]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
H [auth I]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
G [auth H]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
G [auth H]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
G [auth H]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
F [auth G]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
F [auth G]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
F [auth G]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
E	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
E	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
E	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
DA [auth k]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
DA [auth k]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
DA [auth k]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
D	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
D	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
D	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
CA [auth j]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
CA [auth j]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
CA [auth j]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
C	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
C	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
C	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
BA [auth i]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
BA [auth i]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
BA [auth i]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
B	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
B	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
B	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
AA [auth h]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
AA [auth h]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
AA [auth h]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
A	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
A	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
A	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth h], B, BA [auth i], C, A, AA [auth h], B, BA [auth i], C, CA [auth j], D, DA [auth k], E, F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth S], Q [auth T], R [auth U], S [auth V], T [auth X], U [auth a], V [auth b], W [auth c], X [auth d], Y [auth e], Z [auth g]	PF14505	Domain of unknown function (DUF4438), N-terminal (DUF4438)	Domain of unknown function (DUF4438), N-terminal	This is the N-terminal domain of TM_1086 and related proteins.	Domain
A, AA [auth h], B, BA [auth i], C, A, AA [auth h], B, BA [auth i], C, CA [auth j], D, DA [auth k], E, F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth S], Q [auth T], R [auth U], S [auth V], T [auth X], U [auth a], V [auth b], W [auth c], X [auth d], Y [auth e], Z [auth g]	PF20999	Domain of unknown function (DUF4438), C-terminal (DUF4438_C)	Domain of unknown function (DUF4438), C-terminal	This is the C-terminal domain of TM_1086 which consists of a 3-layer sandwich.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth h], B, BA [auth i], C, A, AA [auth h], B, BA [auth i], C, CA [auth j], D, DA [auth k], E, F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth S], Q [auth T], R [auth U], S [auth V], T [auth X], U [auth a], V [auth b], W [auth c], X [auth d], Y [auth e], Z [auth g]	IPR029433	DUF4438, N-terminal	Domain
A, AA [auth h], B, BA [auth i], C, A, AA [auth h], B, BA [auth i], C, CA [auth j], D, DA [auth k], E, F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth S], Q [auth T], R [auth U], S [auth V], T [auth X], U [auth a], V [auth b], W [auth c], X [auth d], Y [auth e], Z [auth g]	IPR044909	TM_1086 superfamily	Homologous Superfamily
A, AA [auth h], B, BA [auth i], C, A, AA [auth h], B, BA [auth i], C, CA [auth j], D, DA [auth k], E, F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth S], Q [auth T], R [auth U], S [auth V], T [auth X], U [auth a], V [auth b], W [auth c], X [auth d], Y [auth e], Z [auth g]	IPR044910	TM_1086, SG structure domain	Homologous Superfamily
A, AA [auth h], B, BA [auth i], C, A, AA [auth h], B, BA [auth i], C, CA [auth j], D, DA [auth k], E, F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth S], Q [auth T], R [auth U], S [auth V], T [auth X], U [auth a], V [auth b], W [auth c], X [auth d], Y [auth e], Z [auth g]	IPR048399	DUF4438, C-terminal	Domain