Annotations: 3N99

Crystal structure of TM1086

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF4438	e3n99A1	A: beta barrels	X: Immunoglobulin-like beta-sandwich	H: RIFT-related	T: Alanine racemase-C	F: DUF4438	ECOD (v294.2)
A	C1-set	e3n99A2	A: beta barrels	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set	ECOD (v294.2)
AA [auth h]	MreC	e3n99h1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
B	MreC	e3n99B1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
BA [auth i]	MreC	e3n99i1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
C	MreC	e3n99C1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
CA [auth j]	MreC	e3n99j1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
D	MreC	e3n99D1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
F [auth G]	MreC	e3n99G1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
H [auth I]	MreC	e3n99I1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
I [auth J]	MreC	e3n99J1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
J [auth K]	MreC	e3n99K1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
K [auth L]	MreC	e3n99L1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
L [auth M]	MreC	e3n99M1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
M [auth N]	MreC	e3n99N1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
N [auth O]	MreC	e3n99O1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
O [auth P]	MreC	e3n99P1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
P [auth S]	MreC	e3n99S1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
Q [auth T]	MreC	e3n99T1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
R [auth U]	MreC	e3n99U1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
S [auth V]	MreC	e3n99V1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
T [auth X]	MreC	e3n99X1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
U [auth a]	MreC	e3n99a1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
X [auth d]	MreC	e3n99d1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
Y [auth e]	MreC	e3n99e1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
Z [auth g]	MreC	e3n99g1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
W [auth c]	MreC	e3n99c1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
V [auth b]	MreC	e3n99b1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
G [auth H]	MreC	e3n99H1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
E	MreC	e3n99E1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)
DA [auth k]	MreC	e3n99k1	A: beta barrels	X: DEATH domain	H: HTH	T: winged helix domain	F: MreC	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
A	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
A	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
AA [auth h]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
AA [auth h]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
AA [auth h]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
B	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
B	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
B	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
BA [auth i]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
BA [auth i]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
BA [auth i]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
C	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
C	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
C	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
CA [auth j]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
CA [auth j]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
CA [auth j]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
D	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
D	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
D	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
F [auth G]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
F [auth G]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
F [auth G]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
H [auth I]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
H [auth I]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
H [auth I]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
I [auth J]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
I [auth J]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
I [auth J]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
J [auth K]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
J [auth K]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
J [auth K]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
K [auth L]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
K [auth L]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
K [auth L]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
L [auth M]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
L [auth M]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
L [auth M]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
M [auth N]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
M [auth N]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
M [auth N]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
N [auth O]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
N [auth O]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
N [auth O]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
O [auth P]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
O [auth P]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
O [auth P]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
P [auth S]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
P [auth S]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
P [auth S]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
Q [auth T]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
Q [auth T]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
Q [auth T]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
R [auth U]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
R [auth U]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
R [auth U]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
S [auth V]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
S [auth V]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
S [auth V]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
T [auth X]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
T [auth X]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
T [auth X]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
U [auth a]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
U [auth a]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
U [auth a]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
X [auth d]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
X [auth d]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
X [auth d]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
Y [auth e]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
Y [auth e]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
Y [auth e]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
Z [auth g]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
Z [auth g]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
Z [auth g]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
W [auth c]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
W [auth c]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
W [auth c]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
V [auth b]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
V [auth b]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
V [auth b]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
G [auth H]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
G [auth H]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
G [auth H]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
E	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
E	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
E	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
DA [auth k]	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
DA [auth k]	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
DA [auth k]	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth h], B, BA [auth i], C, A, AA [auth h], B, BA [auth i], C, CA [auth j], D, DA [auth k], E, F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth S], Q [auth T], R [auth U], S [auth V], T [auth X], U [auth a], V [auth b], W [auth c], X [auth d], Y [auth e], Z [auth g]	PF14505	Domain of unknown function (DUF4438), N-terminal (DUF4438)	Domain of unknown function (DUF4438), N-terminal	This is the N-terminal domain of TM_1086 and related proteins.	Domain
A, AA [auth h], B, BA [auth i], C, A, AA [auth h], B, BA [auth i], C, CA [auth j], D, DA [auth k], E, F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth S], Q [auth T], R [auth U], S [auth V], T [auth X], U [auth a], V [auth b], W [auth c], X [auth d], Y [auth e], Z [auth g]	PF20999	Domain of unknown function (DUF4438), C-terminal (DUF4438_C)	Domain of unknown function (DUF4438), C-terminal	This is the C-terminal domain of TM_1086 which consists of a 3-layer sandwich.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth h], B, BA [auth i], C, A, AA [auth h], B, BA [auth i], C, CA [auth j], D, DA [auth k], E, F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth S], Q [auth T], R [auth U], S [auth V], T [auth X], U [auth a], V [auth b], W [auth c], X [auth d], Y [auth e], Z [auth g]	IPR029433	DUF4438, N-terminal	Domain
A, AA [auth h], B, BA [auth i], C, A, AA [auth h], B, BA [auth i], C, CA [auth j], D, DA [auth k], E, F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth S], Q [auth T], R [auth U], S [auth V], T [auth X], U [auth a], V [auth b], W [auth c], X [auth d], Y [auth e], Z [auth g]	IPR044909	TM_1086 superfamily	Homologous Superfamily
A, AA [auth h], B, BA [auth i], C, A, AA [auth h], B, BA [auth i], C, CA [auth j], D, DA [auth k], E, F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth S], Q [auth T], R [auth U], S [auth V], T [auth X], U [auth a], V [auth b], W [auth c], X [auth d], Y [auth e], Z [auth g]	IPR044910	TM_1086, SG structure domain	Homologous Superfamily
A, AA [auth h], B, BA [auth i], C, A, AA [auth h], B, BA [auth i], C, CA [auth j], D, DA [auth k], E, F [auth G], G [auth H], H [auth I], I [auth J], J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth S], Q [auth T], R [auth U], S [auth V], T [auth X], U [auth a], V [auth b], W [auth c], X [auth d], Y [auth e], Z [auth g]	IPR048399	DUF4438, C-terminal	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

3N99 | pdb_00003n99

Crystal structure of TM1086

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage