3MX5
Lassa fever virus nucleoprotein complexed with UTP
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Arenavirus nucleoprotein N-terminal domain-like | 8053525 | 3002201 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Ribonuclease H-like | 8053524 | 3000143 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ribonuclease H-like | 8053524 | 3000143 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Arenavirus nucleoprotein N-terminal domain-like | 8053525 | 3002201 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ribonuclease H-like | 8053524 | 3000143 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Arenavirus nucleoprotein N-terminal domain-like | 8053525 | 3002201 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Arena_nucleocap | e3mx5A1 | A: alpha complex topology | X: N-terminal domain in Lassa fever virus nucleoprotein (From Topology) | H: N-terminal domain in Lassa fever virus nucleoprotein (From Topology) | T: N-terminal domain in Lassa fever virus nucleoprotein | F: Arena_nucleocap | ECOD (1.6) |
A | Arena_ncap_C | e3mx5A2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Arena_ncap_C | ECOD (1.6) |
B | Arena_nucleocap | e3mx5B1 | A: alpha complex topology | X: N-terminal domain in Lassa fever virus nucleoprotein (From Topology) | H: N-terminal domain in Lassa fever virus nucleoprotein (From Topology) | T: N-terminal domain in Lassa fever virus nucleoprotein | F: Arena_nucleocap | ECOD (1.6) |
B | Arena_ncap_C | e3mx5B2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Arena_ncap_C | ECOD (1.6) |
C | Arena_nucleocap | e3mx5C1 | A: alpha complex topology | X: N-terminal domain in Lassa fever virus nucleoprotein (From Topology) | H: N-terminal domain in Lassa fever virus nucleoprotein (From Topology) | T: N-terminal domain in Lassa fever virus nucleoprotein | F: Arena_nucleocap | ECOD (1.6) |
C | Arena_ncap_C | e3mx5C2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Arena_ncap_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.420.410 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
B | 3.30.420.410 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
C | 3.30.420.410 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038115 | Nucleocapsid, C-terminal superfamily | Homologous Superfamily | |
IPR001680 | WD40 repeat | Repeat | |
IPR000229 | Nucleocapsid protein, arenaviridae | Family | |
IPR035083 | Nucleocapsid, N-terminal, Arenaviridae | Domain | |
IPR035084 | Nucleocapsid, C-terminal, Arenaviridae | Domain |