Structure of SopB(155-323)-18mer DNA complex, I23 form
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth B] | PRK13698 | e3mkyB1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PRK13698 | ECOD (1.6) |
| D [auth P] | PRK13698 | e3mkyP1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PRK13698 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C [auth B] | 1.10.10.2830 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | CATH (4.3.0) | |
| D [auth P] | 1.10.10.2830 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth U], B [auth T] | DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3') | - | - | - |
| C [auth B], D [auth P] | Protein sopB | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| C [auth B], D [auth P] | IPR036086 | ParB/Sulfiredoxin superfamily | Homologous Superfamily |
| C [auth B], D [auth P] | IPR003115 | ParB-like, N-terminal domain | Domain |
| C [auth B], D [auth P] | IPR040873 | SopB, HTH domain | Domain |
| C [auth B], D [auth P] | IPR004437 | ParB/RepB/Spo0J partition protein | Domain |
