3LVD | pdb_00003lvd

Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). UV-photoconverted green form.

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd3lvdb_ Alpha and beta proteins (a+b) GFP-like GFP-like Fluorescent proteins automated matches (Aequorea coerulescens ) [TaxId: 210840 ], SCOPe (2.08)
Ad3lvda_ Alpha and beta proteins (a+b) GFP-like GFP-like Fluorescent proteins automated matches (Aequorea coerulescens ) [TaxId: 210840 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyGFP-like 8081027 3000576 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGFP-like 8081027 3000576 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BRVPe3lvdB1 A: a/b three-layered sandwichesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.1)
ARVPe3lvdA1 A: a/b three-layered sandwichesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)
A2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Green fluorescent protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR000786Green fluorescent protein, GFPFamily
A, B
IPR011584Green fluorescent protein-relatedFamily
A, B
IPR009017Green fluorescent proteinHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
GYS Parent Component: SER, TYR, GLY

RESID:  AA0184

PSI-MOD :  L-serine 5-imidazolinone glycine MOD:00192