3LKU
Crystal structure of S. cerevisiae Get4 in complex with an N-terminal fragment of Get5
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | TPR-like | 8090908 | 3001345 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | TPR-like | 8090908 | 3001345 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | TPR-like | 8090908 | 3001345 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | GET5 GET4-binding region-like | 8090909 | 3002469 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | GET5 GET4-binding region-like | 8090909 | 3002469 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | GET5 GET4-binding region-like | 8090909 | 3002469 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | PF04190 | e3lkuC3 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF04190 | ECOD (1.6) |
E | PF04190 | e3lkuE2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF04190 | ECOD (1.6) |
A | PF04190 | e3lkuA2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF04190 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (4.3.0) |
E | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (4.3.0) |
A | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (4.3.0) |
F | 1.20.5.510 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Single helix bin | CATH (4.3.0) |
D | 1.20.5.510 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Single helix bin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04190 | Golgi to ER traffic protein 4 (GET4) | Golgi to ER traffic protein 4 | - | Repeat | |
PF16843 | Binding domain to Get4 on Get5, Golgi to ER traffic protein (Get5_bdg) | Binding domain to Get4 on Get5, Golgi to ER traffic protein | Get5_bdg is the binding domain at the N-terminus of Get5, or Golgi to ER traffic protein 5, in yeast, that binds to Get4. Together with Get3, this tripartite complex is involved in the insertion of tail-anchored proteins in the ER membrane [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011990 | Tetratricopeptide-like helical domain superfamily | Homologous Superfamily | |
IPR007317 | Golgi to ER traffic protein 4 | Family | |
IPR031765 | Mdy2, Get4 binding domain | Domain | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily | |
IPR000626 | Ubiquitin-like domain | Domain | |
IPR040474 | Ubiquitin-like protein MDY2, C-terminal domain | Domain |