3LAQ
Structure-based engineering of species selectivity in the uPA-uPAR interaction
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00051 | e3laqA1 | A: few secondary structure elements | X: Kringle-like (From Topology) | H: Kringle-like (From Topology) | T: Kringle-like | F: PF00051 | ECOD (1.6) |
A | F_UNCLASSIFIED | e3laqA2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth B] | PF00051 | e3laqB1 | A: few secondary structure elements | X: Kringle-like (From Topology) | H: Kringle-like (From Topology) | T: Kringle-like | F: PF00051 | ECOD (1.6) |
C [auth B] | F_UNCLASSIFIED | e3laqB2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth U] | F_UNCLASSIFIED | e3laqU9 | A: few secondary structure elements | X: Snake toxin-like (From Topology) | H: Snake toxin-like (From Topology) | T: Snake toxin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth U] | PF00021 | e3laqU7 | A: few secondary structure elements | X: Snake toxin-like (From Topology) | H: Snake toxin-like (From Topology) | T: Snake toxin-like | F: PF00021 | ECOD (1.6) |
D [auth V] | F_UNCLASSIFIED | e3laqV9 | A: few secondary structure elements | X: Snake toxin-like (From Topology) | H: Snake toxin-like (From Topology) | T: Snake toxin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth V] | PF00021 | e3laqV7 | A: few secondary structure elements | X: Snake toxin-like (From Topology) | H: Snake toxin-like (From Topology) | T: Snake toxin-like | F: PF00021 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
A | 2.40.20.10 | Mainly Beta | Beta Barrel | Plasminogen Kringle 4 | Plasminogen Kringle 4 | CATH (4.3.0) |
C [auth B] | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
C [auth B] | 2.40.20.10 | Mainly Beta | Beta Barrel | Plasminogen Kringle 4 | Plasminogen Kringle 4 | CATH (4.3.0) |
B [auth U] | 2.10.60.10 | Mainly Beta | Ribbon | CD59 | CD59 | CATH (4.3.0) |
D [auth V] | 2.10.60.10 | Mainly Beta | Ribbon | CD59 | CD59 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B] | PF00051 | Kringle domain (Kringle) | Kringle domain | Kringle domains have been found in plasminogen, hepatocyte growth factors, prothrombin, and apolipoprotein A. Structure is disulfide-rich, nearly all-beta. | Domain |
B [auth U], D [auth V] | PF00021 | u-PAR/Ly-6 domain (UPAR_LY6) | u-PAR/Ly-6 domain | This extracellular disulphide bond rich domain is related to Pfam:PF00087. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth B] | IPR018056 | Kringle, conserved site | Conserved Site |
A, C [auth B] | IPR000742 | EGF-like domain | Domain |
A, C [auth B] | IPR013806 | Kringle-like fold | Homologous Superfamily |
A, C [auth B] | IPR038178 | Kringle superfamily | Homologous Superfamily |
A, C [auth B] | IPR009003 | Peptidase S1, PA clan | Homologous Superfamily |
A, C [auth B] | IPR001314 | Peptidase S1A, chymotrypsin family | Family |
A, C [auth B] | IPR033116 | Serine proteases, trypsin family, serine active site | Active Site |
A, C [auth B] | IPR001254 | Serine proteases, trypsin domain | Domain |
A, C [auth B] | IPR043504 | Peptidase S1, PA clan, chymotrypsin-like fold | Homologous Superfamily |
A, C [auth B] | IPR000001 | Kringle | Domain |
B [auth U], D [auth V] | IPR045860 | Snake toxin-like superfamily | Homologous Superfamily |
B [auth U], D [auth V] | IPR016054 | Ly-6 antigen/uPA receptor-like | Domain |
B [auth U], D [auth V] | IPR018363 | CD59 antigen, conserved site | Conserved Site |