3HSM | pdb_00003hsm

Crystal structure of distal N-terminal beta-trefoil domain of Ryanodine Receptor type 1

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd3hsmb_ All beta proteins beta-Trefoil MIR domain Ryanodine receptor N-terminal-like N-terminal domain of ryanodine receptor type 1 rabbit (Oryctolagus cuniculus ) [TaxId: 9986 ], SCOPe (2.08)
Ad3hsma_ All beta proteins beta-Trefoil MIR domain Ryanodine receptor N-terminal-like N-terminal domain of ryanodine receptor type 1 rabbit (Oryctolagus cuniculus ) [TaxId: 9986 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPOTRAe3hsmB1 A: a/b three-layered sandwichesX: CCHHC domainH: CCHHC domainT: CCHHC domainF: POTRAECOD (v294.1)
ALHCe3hsmA1 A: a/b three-layered sandwichesX: Suppressor of Fused, C-terminal domainH: HTHT: winged helix domainF: LHCECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.80.10.50 Mainly Beta Trefoil Trefoil (Acidic Fibroblast Growth Factor, subunit A) CATH (4.3.0)
A2.80.10.50 Mainly Beta Trefoil Trefoil (Acidic Fibroblast Growth Factor, subunit A) CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Ryanodine receptor 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR036300Mir domain superfamilyHomologous Superfamily
A, B
IPR000699RIH domainDomain
A, B
IPR013662RyR/IP3R Homology associated domainDomain
A, B
IPR016093MIR motifDomain
A, B
IPR013320Concanavalin A-like lectin/glucanase domain superfamilyHomologous Superfamily
A, B
IPR003877SPRY domainDomain
A, B
IPR001870B30.2/SPRY domainDomain
A, B
IPR009460Ryanodine Receptor TM 4-6Domain
A, B
IPR015925Ryanodine/Inositol 1,4,5-trisphosphate receptorFamily
A, B
IPR048581Ryanodine receptor, junctional solenoid domainDomain
A, B
IPR035910RyR/IP3 receptor binding core, RIH domain superfamilyHomologous Superfamily
A, B
IPR003032Ryanodine receptor RyrDomain
A, B
IPR035761Ryanodine receptor, SPRY domain 1Domain
A, B
IPR014821Inositol 1,4,5-trisphosphate/ryanodine receptorDomain
A, B
IPR035764Ryanodine receptor, SPRY domain 2Domain
A, B
IPR013333Ryanodine receptorFamily
A, B
IPR043136B30.2/SPRY domain superfamilyHomologous Superfamily
A, B
IPR011992EF-hand domain pairHomologous Superfamily
A, B
IPR005821Ion transport domainDomain
A, B
IPR035762Ryanodine receptor, SPRY domain 3Domain