The Structure of Intact Ap-TbpB (N and C lobes)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d3hola3 | All beta proteins | Handle domain of Transferrin binding protein TbpB-like | Handle domain of Transferrin binding protein TbpB-like | Handle domain of Transferrin binding protein TbpB-like | Handle domain of Transferrin binding protein TbpB | (Actinobacillus pleuropneumoniae ) [TaxId: 715 ], | SCOPe (2.08) |
| A | d3hola1 | Membrane and cell surface proteins and peptides | Transmembrane beta-barrels | OMPA-like | GNA1870 immunodominant domain-like | Transferrin binding protein TbpB barrel | (Actinobacillus pleuropneumoniae ) [TaxId: 715 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | N-lobe and C-lobe of Tf-binding protein B-like | 8047022 | 4006246 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | N-lobe and C-lobe of Tf-binding protein B-like | 8048877 | 4006246 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | TbpB N-lobe and C-lobe beta-barrel domains-like | 8052205 | 3002098 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | TbpB N-lobe and C-lobe beta-barrel domains-like | 8047025 | 3002098 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | TbpB N-lobe and C-lobe handle domains-like | 8052206 | 3002099 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | TbpB N-lobe and C-lobe handle domains-like | 8052207 | 3002099 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | TbpB_C | e3holA3 | A: beta barrels | X: Handle domain in transferrin-binding protein B (From Topology) | H: Handle domain in transferrin-binding protein B (From Topology) | T: Handle domain in transferrin-binding protein B | F: TbpB_C | ECOD (1.6) |
| A | TbpB_A | e3holA1 | A: beta barrels | X: Handle domain in transferrin-binding protein B (From Topology) | H: Handle domain in transferrin-binding protein B (From Topology) | T: Handle domain in transferrin-binding protein B | F: TbpB_A | ECOD (1.6) |
| A | TbpB_B_D | e3holA4 | A: beta barrels | X: Outer membrane meander beta-barrels | H: OMPA-like (From Topology) | T: OMPA-like | F: TbpB_B_D | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.40.128.250 | Mainly Beta | Beta Barrel | Lipocalin | CATH (4.3.0) | |
| A | 2.40.160.90 | Mainly Beta | Beta Barrel | Porin | CATH (4.3.0) | |
| A | 2.40.128.240 | Mainly Beta | Beta Barrel | Lipocalin | CATH (4.3.0) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR011250 | Outer membrane protein/outer membrane enzyme PagP, beta-barrel | Homologous Superfamily | |
| IPR001677 | Transferrin-binding protein B, C-lobe/N-lobe beta-barrel domain | Domain | |
| IPR038669 | TbpB, N-lobe handle domain superfamily | Homologous Superfamily | |
| IPR038197 | TbpB, C-lobe handle domain superfamily | Homologous Superfamily | |
| IPR035316 | Transferrin-binding protein B, C-lobe handle domain | Domain |














