Crystal Structure Analysis of the Middle Domain of the Caf1A Usher
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Usher_2nd | e3fcgB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Usher_2nd | ECOD (1.6) |
| A | Usher_2nd | e3fcgA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Usher_2nd | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.60.40.3110 | Mainly Beta | Sandwich | Immunoglobulin-like | Outer membrane usher protein | CATH (4.3.0) |
| A | 2.60.40.3110 | Mainly Beta | Sandwich | Immunoglobulin-like | Outer membrane usher protein | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| F1 capsule-anchoring protein |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR042186 | Outer membrane usher protein FimD, plug domain | Homologous Superfamily | |
| IPR037224 | PapC, N-terminal domain superfamily | Homologous Superfamily | |
| IPR018030 | Fimbrial membrane usher, conserved site | Conserved Site | |
| IPR025885 | PapC, N-terminal domain | Domain | |
| IPR043142 | PapC-like, C-terminal domain superfamily | Homologous Superfamily | |
| IPR025949 | PapC-like, C-terminal domain | Domain | |
| IPR000015 | Outer membrane usher protein | Family |














