Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3ejja1 All alpha proteins 4-helical cytokines 4-helical cytokines Short-chain cytokines automated matches mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad3ejja2 Artifacts Tags Tags Tags N-terminal Tags mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Bd3ejjb_ All alpha proteins 4-helical cytokines 4-helical cytokines Short-chain cytokines automated matches mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyShort-chain cytokines8074033 4000852 SCOP2 (2022-06-29)
ASCOP2 Superfamily4-helical cytokines8074034 3001717 SCOP2 (2022-06-29)
BSCOP2B Superfamily4-helical cytokines8074034 3001717 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF05337e3ejjA1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: 4-helical cytokines (From Topology)T: 4-helical cytokinesF: PF05337ECOD (1.6)
BPF05337e3ejjB1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: 4-helical cytokines (From Topology)T: 4-helical cytokinesF: PF05337ECOD (1.6)
C [auth X]F_UNCLASSIFIEDe3ejjX3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: F_UNCLASSIFIEDECOD (1.6)
C [auth X]PF00047e3ejjX1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF00047ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.1250.10 Mainly Alpha Up-down Bundle Growth Hormone Chain: ACATH (4.3.0)
B1.20.1250.10 Mainly Alpha Up-down Bundle Growth Hormone Chain: ACATH (4.3.0)
C [auth X]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF05337Macrophage colony stimulating factor-1 (CSF-1) (CSF-1)Macrophage colony stimulating factor-1 (CSF-1)Colony stimulating factor 1 (CSF-1) is a homodimeric polypeptide growth factor whose primary function is to regulate the survival, proliferation, differentiation, and function of cells of the mononuclear phagocytic lineage. This lineage includes mono ...Colony stimulating factor 1 (CSF-1) is a homodimeric polypeptide growth factor whose primary function is to regulate the survival, proliferation, differentiation, and function of cells of the mononuclear phagocytic lineage. This lineage includes mononuclear phagocytic precursors, blood monocytes, tissue macrophages, osteoclasts, and microglia of the brain, all of which possess cell surface receptors for CSF-1. The protein has also been linked with male fertility [1] and mutations in the Csf-1 gene have been found to cause osteopetrosis and failure of tooth eruption [2]. Structurally these are short-chain 4-helical cytokines.
Domain
C [auth X]PF00047Immunoglobulin domain (ig)Immunoglobulin domainMembers of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-prot ...Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-protein and protein-ligand interactions.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Colony stimulating factor-1
C [auth X]Macrophage colony-stimulating factor 1 receptor