3DL3 | pdb_00003dl3

Crystal structure of the tellurite resistance protein TehB. Northeast Structural Genomics Consortium target VfR98 .

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3dl3a1	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	TehB-like	Tellurite resistance protein B, TehB	(Aliivibrio fischeri ES114 ) [TaxId: 312309 ],	SCOPe (2.08)
C [auth D]	d3dl3d_	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	TehB-like	Tellurite resistance protein B, TehB	(Aliivibrio fischeri ES114 ) [TaxId: 312309 ],	SCOPe (2.08)
D [auth E]	d3dl3e_	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	TehB-like	Tellurite resistance protein B, TehB	(Aliivibrio fischeri ES114 ) [TaxId: 312309 ],	SCOPe (2.08)
E [auth G]	d3dl3g_	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	TehB-like	Tellurite resistance protein B, TehB	(Aliivibrio fischeri ES114 ) [TaxId: 312309 ],	SCOPe (2.08)
F [auth H]	d3dl3h_	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	TehB-like	Tellurite resistance protein B, TehB	(Aliivibrio fischeri ES114 ) [TaxId: 312309 ],	SCOPe (2.08)
G [auth F]	d3dl3f_	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	TehB-like	Tellurite resistance protein B, TehB	(Aliivibrio fischeri ES114 ) [TaxId: 312309 ],	SCOPe (2.08)
H [auth I]	d3dl3i_	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	TehB-like	Tellurite resistance protein B, TehB	(Aliivibrio fischeri ES114 ) [TaxId: 312309 ],	SCOPe (2.08)
B	d3dl3b_	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	TehB-like	Tellurite resistance protein B, TehB	(Aliivibrio fischeri ES114 ) [TaxId: 312309 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	TehB-like	8028443	4001921	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Clavaminate synthase-like	8040822	3001848	SCOP2 (2022-06-29)
C [auth D]	SCOP2B Superfamily	Clavaminate synthase-like	8040822	3001848	SCOP2B (2022-06-29)
D [auth E]	SCOP2B Superfamily	Clavaminate synthase-like	8040822	3001848	SCOP2B (2022-06-29)
E [auth G]	SCOP2B Superfamily	Clavaminate synthase-like	8040822	3001848	SCOP2B (2022-06-29)
F [auth H]	SCOP2B Superfamily	Clavaminate synthase-like	8040822	3001848	SCOP2B (2022-06-29)
G [auth F]	SCOP2B Superfamily	Clavaminate synthase-like	8040822	3001848	SCOP2B (2022-06-29)
H [auth I]	SCOP2B Superfamily	Clavaminate synthase-like	8040822	3001848	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Clavaminate synthase-like	8040822	3001848	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF1971	e3dl3A1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: DUF1971	ECOD (1.6)
C [auth D]	DUF1971	e3dl3D1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: DUF1971	ECOD (1.6)
D [auth E]	DUF1971	e3dl3E1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: DUF1971	ECOD (1.6)
E [auth G]	DUF1971	e3dl3G1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: DUF1971	ECOD (1.6)
F [auth H]	DUF1971	e3dl3H1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: DUF1971	ECOD (1.6)
G [auth F]	DUF1971	e3dl3F1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: DUF1971	ECOD (1.6)
H [auth I]	DUF1971	e3dl3I1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: DUF1971	ECOD (1.6)
B	DUF1971	e3dl3B1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix (From Topology)	T: Double-stranded beta-helix	F: DUF1971	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)
C [auth D]	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)
D [auth E]	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)
E [auth G]	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)
F [auth H]	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)
G [auth F]	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)
H [auth I]	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)
B	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C [auth D], D [auth E], E [auth G], A, B, C [auth D], D [auth E], E [auth G], F [auth H], G [auth F], H [auth I]	PF09313	TehB-like domain (TehB-like)	TehB-like domain	This domain, previously known as DUF1971, is found at the N-terminal associated with Pfam:PF03848, and covering the whole length of the sequence in other bacterial uncharacterised proteins. TehB plays a role in both resistance to oxidative damage and ...	This domain, previously known as DUF1971, is found at the N-terminal associated with Pfam:PF03848, and covering the whole length of the sequence in other bacterial uncharacterised proteins. TehB plays a role in both resistance to oxidative damage and haem uptake/utilisation, and is important for virulence of this organism in an animal model of invasive disease. It also protects H.influenzae from tellurite exposure in vitro [1]. In Escherichia coli, TehB is thought to utilise a methyltransferase activity in the detoxification of tellurite [2].	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C [auth D], D [auth E], E [auth G], A, B, C [auth D], D [auth E], E [auth G], F [auth H], G [auth F], H [auth I]	IPR015392	TehB/YeaR-like domain	Domain
A, B, C [auth D], D [auth E], E [auth G], A, B, C [auth D], D [auth E], E [auth G], F [auth H], G [auth F], H [auth I]	IPR014510	Tellurite resistance predicted, YeaR	Family
A, B, C [auth D], D [auth E], E [auth G], A, B, C [auth D], D [auth E], E [auth G], F [auth H], G [auth F], H [auth I]	IPR014710	RmlC-like jelly roll fold	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.