Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyBet v1-like8063081 3000738 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyBet v1-like8063081 3000738 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyBet v1-like8063081 3000738 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyBet v1-like8063081 3000738 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPF00407e3c0vB1 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF00407ECOD (1.6)
CPF00407e3c0vC1 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF00407ECOD (1.6)
DPF00407e3c0vD1 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF00407ECOD (1.6)
APF00407e3c0vA1 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF00407ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00407Pathogenesis-related protein Bet v 1 family (Bet_v_1)Pathogenesis-related protein Bet v 1 familyThis family is named after Bet v 1, the major birch pollen allergen. This protein belongs to family 10 of plant pathogenesis-related proteins (PR-10), cytoplasmic proteins of 15-17 kd that are wide-spread among dicotyledonous plants [1]. In recent ye ...This family is named after Bet v 1, the major birch pollen allergen. This protein belongs to family 10 of plant pathogenesis-related proteins (PR-10), cytoplasmic proteins of 15-17 kd that are wide-spread among dicotyledonous plants [1]. In recent years, a number of diverse plant proteins with low sequence similarity to Bet v 1 was identified. A classification by sequence similarity yielded several subfamilies related to PR-10 [2]: - Pathogenesis-related proteins PR-10: These proteins were identified as major tree pollen allergens in birch and related species (hazel, alder), as plant food allergens expressed in high levels in fruits, vegetables and seeds (apple, celery, hazelnut), and as pathogenesis-related proteins whose expression is induced by pathogen infection, wounding, or abiotic stress. Hyp-1 (Swiss:Q8H1L1), an enzyme involved in the synthesis of the bioactive naphthodianthrone hypericin in St. John's wort (Hypericum perforatum) also belongs to this family. Most of these proteins were found in dicotyledonous plants. In addition, related sequences were identified in monocots and conifers. - Cytokinin-specific binding proteins: These legume proteins bind cytokinin plant hormones [3]. - (S)-Norcoclaurine synthases are enzymes catalysing the condensation of dopamine and 4-hydroxyphenylacetaldehyde to (S)-norcoclaurine, the first committed step in the biosynthesis of benzylisoquinoline alkaloids such as morphine [4]. -Major latex proteins and ripening-related proteins are proteins of unknown biological function that were first discovered in the latex of opium poppy (Papaver somniferum) and later found to be upregulated during ripening of fruits such as strawberry and cucumber [4]. The occurrence of Bet v 1-related proteins is confined to seed plants with the exception of a cytokinin-binding protein from the moss Physcomitrella patens (Swiss:Q9AXI3).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Cytokinin-specific binding protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR024949Bet v I type allergenFamily
A, B, C, D
IPR000916Bet v I/Major latex proteinDomain
A, B, C, D
IPR023393START-like domain superfamilyHomologous Superfamily