3BQQ
Crystal Structure of Human Saposin D (triclinic)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | d3bqqa_ | All alpha proteins | Saposin-like | Saposin | NKL-like | Saposin C | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth B] | d3bqqb_ | All alpha proteins | Saposin-like | Saposin | NKL-like | Saposin C | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D | d3bqqd_ | All alpha proteins | Saposin-like | Saposin | NKL-like | Saposin C | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A [auth C] | d3bqqc_ | All alpha proteins | Saposin-like | Saposin | NKL-like | Saposin C | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | PF03489,PF05184 | e3bqqA1 | A: alpha arrays | X: Saposin-like | H: Saposin-like (From Topology) | T: Saposin-like | F: PF03489,PF05184 | ECOD (1.6) |
C [auth B] | PF03489,PF05184 | e3bqqB1 | A: alpha arrays | X: Saposin-like | H: Saposin-like (From Topology) | T: Saposin-like | F: PF03489,PF05184 | ECOD (1.6) |
D | PF03489,PF05184 | e3bqqD1 | A: alpha arrays | X: Saposin-like | H: Saposin-like (From Topology) | T: Saposin-like | F: PF03489,PF05184 | ECOD (1.6) |
A [auth C] | PF03489,PF05184 | e3bqqC1 | A: alpha arrays | X: Saposin-like | H: Saposin-like (From Topology) | T: Saposin-like | F: PF03489,PF05184 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth A] | 1.10.225.10 | Mainly Alpha | Orthogonal Bundle | NK-Lysin | Saposin-like | CATH (4.3.0) |
C [auth B] | 1.10.225.10 | Mainly Alpha | Orthogonal Bundle | NK-Lysin | Saposin-like | CATH (4.3.0) |
D | 1.10.225.10 | Mainly Alpha | Orthogonal Bundle | NK-Lysin | Saposin-like | CATH (4.3.0) |
A [auth C] | 1.10.225.10 | Mainly Alpha | Orthogonal Bundle | NK-Lysin | Saposin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], B [auth A], C [auth B], D | PF05184 | Saposin-like type B, region 1 (SapB_1) | Saposin-like type B, region 1 | Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH sta ... | Domain |
A [auth C], B [auth A], C [auth B], D | PF03489 | Saposin-like type B, region 2 (SapB_2) | Saposin-like type B, region 2 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C], B [auth A], C [auth B], D | IPR011001 | Saposin-like | Homologous Superfamily |
A [auth C], B [auth A], C [auth B], D | IPR008373 | Saposin | Family |
A [auth C], B [auth A], C [auth B], D | IPR007856 | Saposin-like type B, region 1 | Domain |
A [auth C], B [auth A], C [auth B], D | IPR021165 | Saposin, chordata | Family |
A [auth C], B [auth A], C [auth B], D | IPR003119 | Saposin A-type domain | Domain |
A [auth C], B [auth A], C [auth B], D | IPR008139 | Saposin B type domain | Domain |
A [auth C], B [auth A], C [auth B], D | IPR008138 | Saposin B type, region 2 | Domain |