3BM3
Restriction endonuclease PspGI-substrate DNA complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | EcoRII-C | e3bm3A2 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: EcoRII-C | ECOD (1.6) |
D [auth B] | EcoRII-C | e3bm3B2 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: EcoRII-C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 3.40.91.80 | Alpha Beta | 3-Layer(aba) Sandwich | Restriction Endonuclease | CATH (4.3.0) | |
D [auth B] | 3.40.91.80 | Alpha Beta | 3-Layer(aba) Sandwich | Restriction Endonuclease | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], D [auth B] | PF09019 | EcoRII C terminal (EcoRII-C) | EcoRII C terminal | The C-terminal catalytic domain of the Restriction Endonuclease EcoRII has a restriction endonuclease-like fold with a central five-stranded mixed beta-sheet surrounded on both sides by alpha-helices. It cleaves DNA specifically at single 5' CCWGG si ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A], D [auth B] | IPR011335 | Restriction endonuclease type II-like | Homologous Superfamily |
C [auth A], D [auth B] | IPR038365 | EcoRII, C-terminal domain superfamily | Homologous Superfamily |
C [auth A], D [auth B] | IPR015109 | Restriction endonuclease, type II, EcoRII, C-terminal | Domain |