2HIL | pdb_00002hil

Structure of the Neisseria gonorrhoeae Type IV pilus filament from x-ray crystallography and electron cryomicroscopy

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
R	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Pili subunits	8034848	3000097	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
R	PCNA_N	e2hilR1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
Q	PCNA_N	e2hilQ1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
P	PCNA_N	e2hilP1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
O	PCNA_N	e2hilO1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
N	PCNA_N	e2hilN1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
M	PCNA_N	e2hilM1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
L	PCNA_N	e2hilL1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
K	PCNA_N	e2hilK1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
J	PCNA_N	e2hilJ1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
I	PCNA_N	e2hilI1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
H	PCNA_N	e2hilH1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
G	PCNA_N	e2hilG1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
F	PCNA_N	e2hilF1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
E	PCNA_N	e2hilE1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
D	PCNA_N	e2hilD1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
C	PCNA_N	e2hilC1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
B	PCNA_N	e2hilB1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)
A	PCNA_N	e2hilA1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: PCNA_N	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R	Fimbrial protein	-	cell adhesion cellular process	cellular anatomical structure membrane pilus cell projection

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R	IPR012902	Prokaryotic N-terminal methylation site	PTM
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R	IPR001082	Fimbrial protein pilin	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R	IPR045584	Pilin-like	Homologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R	OPM	Transmembrane	Bitopic proteins	Type IV pilin	Bacterial pilin

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R	MEA	Parent Component: PHE RESID: AA0065 PSI-MOD : N-methyl-L-phenylalanine MOD:00074

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.