2YJL | pdb_00002yjl

Structural characterization of a secretin pilot protein from the type III secretion system (T3SS) of Pseudomonas aeruginosa


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyYscW-like 8089856 3002394 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyYscW-like 8089856 3002394 SCOP2B (2022-06-29)
ASCOP2 FamilyYscW-like 8045245 4004370 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyYscW-like 8089856 3002394 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CFeoB_Cytoe2yjlC1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: FeoB_CytoECOD (v294.1)
BFeoB_Cytoe2yjlB1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: FeoB_CytoECOD (v294.1)
AGlyco_hydro_2_Ce2yjlA1 A: a/b three-layered sandwichesX: Cystatin-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_2_CECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C2.60.40.2990 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
B2.60.40.2990 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
A2.60.40.2990 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF09619Type III secretion system lipoprotein chaperone (YscW) (YscW)Type III secretion system lipoprotein chaperone (YscW)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
EXOENZYME S SYNTHESIS PROTEIN B- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR053740Type III Secretion System PilotinHomologous Superfamily
A, B, C
IPR039366Type 3 secretion system pilotinFamily