2RIR
Crystal structure of dipicolinate synthase, A chain, from Bacillus subtilis
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | D-2-hydroxyacid dehydrogenase-like | 8095910 | 3000044 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Dipicolinate synthase A chain-like | 8046347 | 4005035 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | D-2-hydroxyacid dehydrogenase-like | 8095910 | 3000044 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | D-2-hydroxyacid dehydrogenase-like | 8095910 | 3000044 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | D-2-hydroxyacid dehydrogenase-like | 8095910 | 3000044 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | D-2-hydroxyacid dehydrogenase-like | 8095910 | 3000044 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | D-2-hydroxyacid dehydrogenase-like | 8095910 | 3000044 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | D-2-hydroxyacid dehydrogenase-like | 8095910 | 3000044 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | D-2-hydroxyacid dehydrogenase-like | 8095910 | 3000044 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01262 | e2rirA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF01262 | ECOD (1.6) |
A | PF16924 | e2rirA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: PF16924 | ECOD (1.6) |
B | PF01262 | e2rirB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF01262 | ECOD (1.6) |
B | PF16924 | e2rirB2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: PF16924 | ECOD (1.6) |
C | PF01262 | e2rirC1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF01262 | ECOD (1.6) |
C | PF16924 | e2rirC2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: PF16924 | ECOD (1.6) |
D | PF01262 | e2rirD1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF01262 | ECOD (1.6) |
D | PF16924 | e2rirD2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: PF16924 | ECOD (1.6) |
E | PF01262 | e2rirE2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF01262 | ECOD (1.6) |
E | PF16924 | e2rirE1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: PF16924 | ECOD (1.6) |
F | PF01262 | e2rirF1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF01262 | ECOD (1.6) |
F | PF16924 | e2rirF2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: PF16924 | ECOD (1.6) |
G | PF01262 | e2rirG1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF01262 | ECOD (1.6) |
G | PF16924 | e2rirG2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: PF16924 | ECOD (1.6) |
H | PF01262 | e2rirH1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF01262 | ECOD (1.6) |
H | PF16924 | e2rirH2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: PF16924 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
C | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
D | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
E | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
F | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
G | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
H | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16924 | Dipicolinate synthase subunit A N-terminal domain (DpaA_N) | Dipicolinate synthase subunit A N-terminal domain | - | Domain | |
PF01262 | Alanine dehydrogenase/PNT, C-terminal domain (AlaDh_PNT_C) | Alanine dehydrogenase/PNT, C-terminal domain | This family now also contains the lysine 2-oxoglutarate reductases. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Dipicolinate synthase, A chain | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR031629 | Dipicolinate synthase subunit A, N-terminal | Domain | |
IPR014215 | Dipicolinic acid synthetase subunit A | Family | |
IPR007698 | Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain | Domain |