Annotations: 2QQP

Crystal Structure of Authentic Providence Virus

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
G	SCOP2 Family	Tetraviridae-like VP	8100031	4000809	SCOP2 (2022-06-29)
G	SCOP2 Superfamily	Positive stranded ssRNA viruses-like	8100032	3000918	SCOP2 (2022-06-29)
E	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8100032	3000918	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8100032	3000918	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8100032	3000918	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
G		e2qqpG1	A: alpha arrays	X: HTH	H: HTH	T: winged helix domain	F:	ECOD (v295.2)
E	CRISPR_Cse2	e2qqpE1	A: alpha arrays	X: CRISPR-associated protein Cse2	H: CRISPR-associated protein Cse2	T: CRISPR-associated protein Cse2	F: CRISPR_Cse2	ECOD (v295.2)
C	CRISPR_Cse2	e2qqpC1	A: alpha arrays	X: CRISPR-associated protein Cse2	H: CRISPR-associated protein Cse2	T: CRISPR-associated protein Cse2	F: CRISPR_Cse2	ECOD (v295.2)
A		e2qqpA1	A: alpha arrays	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F:	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	6.10.140.650	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
G	1.20.1690.20	Mainly Alpha	Up-down Bundle	V-type ATP synthase subunit C fold		CATH (4.3.0)
G	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
G	2.60.40.4260	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
E	1.20.1690.20	Mainly Alpha	Up-down Bundle	V-type ATP synthase subunit C fold		CATH (4.3.0)
E	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
E	2.60.40.4260	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
C	6.10.350.10	Special	Helix non-globular	V-type ATP synthase subunit C fold		CATH (4.3.0)
C	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
C	2.60.40.4260	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
A	6.10.350.10	Special	Helix non-globular	V-type ATP synthase subunit C fold		CATH (4.3.0)
A	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
A	2.60.40.4260	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth R]	RNA (5'-R(UPUPUPU)-3')	-	-	-
B, D, F, H	p81	cation binding ion binding binding metal ion binding small molecule binding identical protein binding protein binding	-	-
A, C, E, G	p81	cation binding ion binding binding metal ion binding small molecule binding identical protein binding protein binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B, D, F, H	IPR029053	Viral coat protein subunit	Homologous Superfamily
B, D, F, H	IPR005313	Peptidase N2	Family
A, C, E, G	IPR029053	Viral coat protein subunit	Homologous Superfamily
A, C, E, G	IPR005313	Peptidase N2	Family