2OJQ
Crystal structure of Alix V domain
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.120.560 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | alix/aip1 in complex with the ypdl late domain | CATH (4.3.0) |
A | 1.20.140.50 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13949 | ALIX V-shaped domain binding to HIV (ALIX_LYPXL_bnd) | ALIX V-shaped domain binding to HIV | The binding of the LYPxL motif of late HIV p6Gag and EIAV p9Gag to this domain is necessary for viral budding.This domain is generally central between an N-terminal Bro1 domain, Pfam:PF03097 and a C-terminal proline-rich domain. The retroviruses thus ... | Domain | |
PF03097 | BRO1-like domain (BRO1) | BRO1-like domain | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004328 | BRO1 domain | Domain | |
IPR025304 | ALIX V-shaped domain | Domain | |
IPR038499 | BRO1 domain superfamily | Homologous Superfamily | |
IPR045251 | Vacuolar protein-sorting protein Bro1-like | Family |