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2MPW
Solution structure of the LysM region of the E. coli Intimin periplasmic domain
External Resource: Annotation
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Domain Annotation: ECOD Classification
ECOD Database Homepage
Chains
Family Name
Domain Identifier
Architecture
Possible Homology
Homology
Topology
Family
Provenance Source (Version)
A
LysM_3
e2mpwA1
A: alpha arrays
X: HTH
H: LysM domain (From Topology)
T: LysM domain
F: LysM_3
ECOD (1.6)
Protein Family Annotation
Pfam Database Homepage
Chains
Accession
Name
Description
Comments
Source
A
PF01476
LysM domain (LysM)
LysM domain
The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation [1]. This domain may have a general peptidoglycan binding function. The structure of this domain is known [2].
Domain
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
Intimin
-
cell adhesion
cellular process
cell periphery
cell outer membrane
external encapsulating structure
membrane
cell envelope
outer membrane
cellular anatomical entity
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR038177
Inverse autotransporter, beta-domain superfamily
Homologous Superfamily
A
IPR003535
Intimin/invasin bacterial adhesion mediator protein
Family
A
IPR003344
Big-1 (bacterial Ig-like domain 1) domain
Domain
A
IPR016187
C-type lectin fold
Homologous Superfamily
A
IPR013117
Intimin, C-terminal
Domain
A
IPR003343
Bacterial Ig-like domain, group 2
Domain
A
IPR051715
Intimin/Invasin domain-containing protein
Family
A
IPR013783
Immunoglobulin-like fold
Homologous Superfamily
A
IPR016186
C-type lectin-like/link domain superfamily
Homologous Superfamily
A
IPR024519
Inverse autotransporter, beta-domain
Domain
A
IPR018392
LysM domain
Domain
A
IPR008964
Invasin/intimin cell-adhesion fragments
Homologous Superfamily
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