2LR6 | pdb_00002lr6

NMR structure of a LINE-1 type transposase domain-containing protein 1 (L1TD1) from Homo sapiens

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyL1ORF1p CTD-like 8052164 3002096 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyL1ORF1p CTD-like 8052164 3002096 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be2lr6B1 A: beta-GraspX: Ubiquitin-relatedH: Ubiquitin-likeT: FtsJF:ECOD (20:10:01)
Ae2lr6A1 A: Alpha-beta plaitsX: Phage tail protein-likeH: Phage tail protein-likeT: DUF4488F:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF17490L1 transposable element dsRBD-like domain (Tnp_22_dsRBD)L1 transposable element dsRBD-like domainThis entry represents the double stranded RNA-binding-like domain. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
LINE-1 type transposase domain-containing protein 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR042566L1 transposable element, C-terminal domainHomologous Superfamily
A, B
IPR035300L1 transposable element, dsRBD-like domainDomain
A, B
IPR043636L1 transposable element, RRM domainDomain
A, B
IPR004244Transposase, L1Family

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, B
Pharos:  Q5T7N2