2LE4
Solution structure of the HMG box DNA-binding domain of human stem cell transcription factor Sox2
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2le4a1 | All alpha proteins | HMG-box | HMG-box | HMG-box | Sox-2 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d2le4a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.30.10 | Mainly Alpha | Orthogonal Bundle | DNA Binding (I), subunit A | High mobility group box domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00505 | HMG (high mobility group) box (HMG_box) | HMG (high mobility group) box | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036910 | High mobility group box domain superfamily | Homologous Superfamily | |
IPR022097 | Transcription factor SOX | Family | |
IPR050140 | SRY-related HMG-box transcription factors | Family | |
IPR009071 | High mobility group box domain | Domain |