2KW6 | pdb_00002kw6

Solution NMR Structure of Cyclin-dependent kinase 2-associated protein 1 (CDK2-associated protein 1; oral cancer suppressor Deleted in oral cancer 1, DOC-1) from H.sapiens, Northeast Structural Genomics Consortium Target Target HR3057H

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	CDK2AP1-like	8053891	3002239	SCOP2B (2022-06-29)
A	SCOP2 Family	CDK2AP1-like	8045626	4004575	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	CDK2AP1-like	8053891	3002239	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	CDK2AP	e2kw6B1	A: a/b three-layered sandwiches	X: Cyclin-dependent kinase 2-associated protein 1 C-terminal domain	H: Cyclin-dependent kinase 2-associated protein 1 C-terminal domain	T: Cyclin-dependent kinase 2-associated protein 1 C-terminal domain	F: CDK2AP	ECOD (v294.1)
A	CDK2AP	e2kw6A1	A: a/b three-layered sandwiches	X: Cyclin-dependent kinase 2-associated protein 1 C-terminal domain	H: Cyclin-dependent kinase 2-associated protein 1 C-terminal domain	T: Cyclin-dependent kinase 2-associated protein 1 C-terminal domain	F: CDK2AP	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	6.10.140.1300	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
A	6.10.140.1300	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF09806	Cyclin-dependent kinase 2-associated protein (CDK2AP)	Cyclin-dependent kinase 2-associated protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Cyclin-dependent kinase 2-associated protein 1	protein binding binding DNA polymerase binding enzyme binding	regulation of cellular process positive regulation of phosphorylation regulation of protein modification process regulation of protein phosphorylation positive regulation of protein metabolic process positive regulation of biological process positive regulation of phosphate metabolic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of protein modification process phosphate-containing compound metabolic process positive regulation of macromolecule metabolic process protein metabolic process positive regulation of protein phosphorylation regulation of cellular process positive regulation of phosphorylation regulation of protein modification process regulation of protein phosphorylation positive regulation of protein metabolic process positive regulation of biological process positive regulation of phosphate metabolic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of protein modification process phosphate-containing compound metabolic process positive regulation of macromolecule metabolic process protein metabolic process positive regulation of protein phosphorylation phosphorus metabolic process protein modification process positive regulation of cellular process regulation of biological process protein phosphorylation positive regulation of phosphorus metabolic process phosphorylation regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process macromolecule modification cellular process metabolic process regulation of phosphorus metabolic process regulation of phosphorylation macromolecule metabolic process regulation of metabolic process RNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II regulation of biosynthetic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription DNA-templated DNA replication DNA replication DNA metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol perinuclear region of cytoplasm membrane-bounded organelle protein-containing complex ATPase complex nucleus membrane-enclosed lumen nuclear protein-containing complex transcription regulator complex chromosome intracellular organelle lumen cellular anatomical structure intracellular anatomical structure cytoplasm cytosol perinuclear region of cytoplasm membrane-bounded organelle protein-containing complex ATPase complex nucleus membrane-enclosed lumen nuclear protein-containing complex transcription regulator complex chromosome intracellular organelle lumen histone deacetylase complex intracellular organelle nucleoplasm membraneless organelle NuRD complex SWI/SNF superfamily-type complex catalytic complex intracellular membraneless organelle chromatin intracellular membrane-bounded organelle organelle lumen organelle CHD-type complex nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR017266	Cyclin-dependent kinase 2-associated protein 1/2	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: O14519	allergic rhinitis autism spectrum disorder vascular disease anorexia nervosa IgA glomerulonephritis attention deficit hyperactivity disorder, inattentive type osteoarthritis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.