2KHL | pdb_00002khl

Refined solution structure of Methanosarcina thermophila protein MC1

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2khla_	Alpha and beta proteins (a+b)	Chromosomal protein MC1	Chromosomal protein MC1	Chromosomal protein MC1	Chromosomal protein MC1	(Methanosarcina thermophila ) [TaxId: 2210 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Chromosomal protein MC1	8042376	3001400	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	MC1	e2khlA1	A: a+b two layers	X: Chromosomal protein MC1 (From Topology)	H: Chromosomal protein MC1 (From Topology)	T: Chromosomal protein MC1	F: MC1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.470.10	Alpha Beta	Roll	chromosomal protein mc1	Chromosomal protein MC1	CATH (4.2.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF05854	Non-histone chromosomal protein MC1 (MC1)	Non-histone chromosomal protein MC1	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Chromosomal protein MC1	DNA binding binding nucleic acid binding	cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress response to stress cellular process metabolic process macromolecule metabolic process DNA protection	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR008674	Chromosomal protein MC1	Family
A	IPR036620	Chromosomal protein MC1 superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.