2JS1 | pdb_00002js1

Solution NMR structure of the homodimer protein YVFG from Bacillus subtilis, Northeast Structural Genomics Consortium Target SR478

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2js1b2	All alpha proteins	Open three-helical up-and-down bundle	YvfG-like	YvfG-like	Hypothetical protein YvfG	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
B	d2js1b3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
A	d2js1a2	All alpha proteins	Open three-helical up-and-down bundle	YvfG-like	YvfG-like	Hypothetical protein YvfG	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
A	d2js1a3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	YvfG-like	8034114	3001212	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	YvfG-like	8034114	3001212	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	YvfG	e2js1B1	A: alpha bundles	X: YvfG-like	H: YvfG-like (From Topology)	T: YvfG-like	F: YvfG	ECOD (1.6)
A	YvfG	e2js1A1	A: alpha bundles	X: YvfG-like	H: YvfG-like (From Topology)	T: YvfG-like	F: YvfG	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	6.10.140.40	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
A	6.10.140.40	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF09628	YvfG protein (YvfG)	YvfG protein	Yvfg is a hypothetical protein of 71 residues expressed in some bacteria. The monomer consists of two parallel alpha helices, and the protein crystallises as a homo-dimer.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR018590	Uncharacterised protein YvfG	Family
A, B	IPR037247	YvfG domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.