Solution NMR structure of the homodimer protein YVFG from Bacillus subtilis, Northeast Structural Genomics Consortium Target SR478
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d2js1b2 | All alpha proteins | Open three-helical up-and-down bundle | YvfG-like | YvfG-like | Hypothetical protein YvfG | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
| B | d2js1b3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
| A | d2js1a2 | All alpha proteins | Open three-helical up-and-down bundle | YvfG-like | YvfG-like | Hypothetical protein YvfG | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
| A | d2js1a3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | TFR_dimer | e2js1B1 | A: beta barrels | X: ETN0001 domain-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: TFR_dimer | ECOD (v294.2) |
| A | TFR_dimer | e2js1A1 | A: beta barrels | X: ETN0001 domain-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: TFR_dimer | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 6.10.140.40 | Special | Helix non-globular | Helix Hairpins | CATH (4.3.0) | |
| A | 6.10.140.40 | Special | Helix non-globular | Helix Hairpins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF09628 | YvfG protein (YvfG) | YvfG protein | Yvfg is a hypothetical protein of 71 residues expressed in some bacteria. The monomer consists of two parallel alpha helices, and the protein crystallises as a homo-dimer. | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR018590 | Uncharacterised protein YvfG | Family | |
| IPR037247 | YvfG domain superfamily | Homologous Superfamily |














