2HV2 | pdb_00002hv2

Crystal Structure of Conserved Protein of Unknown Function from Enterococcus faecalis V583 at 2.4 A Resolution, Probable N-Acyltransferase

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F	d2hv2f1	Alpha and beta proteins (a+b)	SCP-like	SCP-like	EF1021 C-terminal domain-like	Hypothetical protein EF1021	(Enterococcus faecalis ) [TaxId: 1351 ],	SCOPe (2.08)
F	d2hv2f2	Alpha and beta proteins (a+b)	Acyl-CoA N-acyltransferases (Nat)	Acyl-CoA N-acyltransferases (Nat)	EF1021-like	Hypothetical protein EF1021	(Enterococcus faecalis ) [TaxId: 1351 ],	SCOPe (2.08)
E	d2hv2e1	Alpha and beta proteins (a+b)	SCP-like	SCP-like	EF1021 C-terminal domain-like	Hypothetical protein EF1021	(Enterococcus faecalis ) [TaxId: 1351 ],	SCOPe (2.08)
E	d2hv2e2	Alpha and beta proteins (a+b)	Acyl-CoA N-acyltransferases (Nat)	Acyl-CoA N-acyltransferases (Nat)	EF1021-like	Hypothetical protein EF1021	(Enterococcus faecalis ) [TaxId: 1351 ],	SCOPe (2.08)
D	d2hv2d1	Alpha and beta proteins (a+b)	SCP-like	SCP-like	EF1021 C-terminal domain-like	Hypothetical protein EF1021	(Enterococcus faecalis ) [TaxId: 1351 ],	SCOPe (2.08)
D	d2hv2d2	Alpha and beta proteins (a+b)	Acyl-CoA N-acyltransferases (Nat)	Acyl-CoA N-acyltransferases (Nat)	EF1021-like	Hypothetical protein EF1021	(Enterococcus faecalis ) [TaxId: 1351 ],	SCOPe (2.08)
C	d2hv2c1	Alpha and beta proteins (a+b)	SCP-like	SCP-like	EF1021 C-terminal domain-like	Hypothetical protein EF1021	(Enterococcus faecalis ) [TaxId: 1351 ],	SCOPe (2.08)
C	d2hv2c2	Alpha and beta proteins (a+b)	Acyl-CoA N-acyltransferases (Nat)	Acyl-CoA N-acyltransferases (Nat)	EF1021-like	Hypothetical protein EF1021	(Enterococcus faecalis ) [TaxId: 1351 ],	SCOPe (2.08)
B	d2hv2b1	Alpha and beta proteins (a+b)	SCP-like	SCP-like	EF1021 C-terminal domain-like	Hypothetical protein EF1021	(Enterococcus faecalis ) [TaxId: 1351 ],	SCOPe (2.08)
B	d2hv2b2	Alpha and beta proteins (a+b)	Acyl-CoA N-acyltransferases (Nat)	Acyl-CoA N-acyltransferases (Nat)	EF1021-like	Hypothetical protein EF1021	(Enterococcus faecalis ) [TaxId: 1351 ],	SCOPe (2.08)
A	d2hv2a1	Alpha and beta proteins (a+b)	SCP-like	SCP-like	EF1021 C-terminal domain-like	Hypothetical protein EF1021	(Enterococcus faecalis ) [TaxId: 1351 ],	SCOPe (2.08)
A	d2hv2a2	Alpha and beta proteins (a+b)	Acyl-CoA N-acyltransferases (Nat)	Acyl-CoA N-acyltransferases (Nat)	EF1021-like	Hypothetical protein EF1021	(Enterococcus faecalis ) [TaxId: 1351 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	SCP2-like	8034281	3000148	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Acyl-CoA N-acyltransferases (Nat)	8034285	3000403	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	SCP2-like	8034281	3000148	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Acyl-CoA N-acyltransferases (Nat)	8034285	3000403	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Acyl-CoA N-acyltransferases (Nat)	8034285	3000403	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	SCP2-like	8034281	3000148	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	SCP2-like	8034281	3000148	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Acyl-CoA N-acyltransferases (Nat)	8034285	3000403	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	SCP2-like	8034281	3000148	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Acyl-CoA N-acyltransferases (Nat)	8034285	3000403	SCOP2B (2022-06-29)
A	SCOP2 Family	EF1021 C-terminal domain-like	8021901	4002273	SCOP2 (2022-06-29)
A	SCOP2 Family	EF1021-like	8021905	4002291	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	SCP2-like	8034281	3000148	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Acyl-CoA N-acyltransferases (Nat)	8034285	3000403	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F		e2hv2F3	A: beta-Grasp	X: Ubiquitin-related	H: Ubiquitin-like	T: tRNA-synt_2b	F:	ECOD (20:10:01)
F		e2hv2F4	A: POZ domain	X: POZ domain	H: POZ domain	T: Acetyltransf_1	F:	ECOD (20:10:01)
E		e2hv2E3	A: beta-Grasp	X: Ubiquitin-related	H: Ubiquitin-like	T: tRNA-synt_2b	F:	ECOD (20:10:01)
E		e2hv2E4	A: POZ domain	X: POZ domain	H: POZ domain	T: Acetyltransf_1	F:	ECOD (20:10:01)
D		e2hv2D3	A: beta-Grasp	X: Ubiquitin-related	H: Ubiquitin-like	T: tRNA-synt_2b	F:	ECOD (20:10:01)
D		e2hv2D4	A: POZ domain	X: POZ domain	H: POZ domain	T: Acetyltransf_1	F:	ECOD (20:10:01)
C		e2hv2C3	A: beta-Grasp	X: Ubiquitin-related	H: Ubiquitin-like	T: tRNA-synt_2b	F:	ECOD (20:10:01)
C		e2hv2C4	A: POZ domain	X: POZ domain	H: POZ domain	T: Acetyltransf_1	F:	ECOD (20:10:01)
B		e2hv2B3	A: beta-Grasp	X: Ubiquitin-related	H: Ubiquitin-like	T: tRNA-synt_2b	F:	ECOD (20:10:01)
B		e2hv2B5	A: POZ domain	X: POZ domain	H: POZ domain	T: Acetyltransf_1	F:	ECOD (20:10:01)
B		e2hv2B1	A: DEATH domain	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Acetyltransf_19	F:	ECOD (20:10:01)
A		e2hv2A1	A: Sterol carrier protein-like	X: Sterol carrier protein, SCP-related	H: Sterol carrier protein, SCP-related	T: SCP2_2	F:	ECOD (20:10:01)
A		e2hv2A2	A: all-alpha NTP pyrophosphatases	X: all-alpha NTP pyrophosphatases	H: Hypothetical protein AF_0060	T: MazG	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	3.40.630.30	Alpha Beta	3-Layer(aba) Sandwich	Aminopeptidase	Gcn5-related N-acetyltransferase (GNAT)	CATH (4.3.0)
F	3.30.1050.10	Alpha Beta	2-Layer Sandwich	Nonspecific Lipid-transfer Protein	Chain A	CATH (4.3.0)
E	3.40.630.30	Alpha Beta	3-Layer(aba) Sandwich	Aminopeptidase	Gcn5-related N-acetyltransferase (GNAT)	CATH (4.3.0)
E	3.30.1050.10	Alpha Beta	2-Layer Sandwich	Nonspecific Lipid-transfer Protein	Chain A	CATH (4.3.0)
D	3.40.630.30	Alpha Beta	3-Layer(aba) Sandwich	Aminopeptidase	Gcn5-related N-acetyltransferase (GNAT)	CATH (4.3.0)
D	3.30.1050.10	Alpha Beta	2-Layer Sandwich	Nonspecific Lipid-transfer Protein	Chain A	CATH (4.3.0)
C	3.40.630.30	Alpha Beta	3-Layer(aba) Sandwich	Aminopeptidase	Gcn5-related N-acetyltransferase (GNAT)	CATH (4.3.0)
C	3.30.1050.10	Alpha Beta	2-Layer Sandwich	Nonspecific Lipid-transfer Protein	Chain A	CATH (4.3.0)
B	3.40.630.30	Alpha Beta	3-Layer(aba) Sandwich	Aminopeptidase	Gcn5-related N-acetyltransferase (GNAT)	CATH (4.3.0)
B	3.30.1050.10	Alpha Beta	2-Layer Sandwich	Nonspecific Lipid-transfer Protein	Chain A	CATH (4.3.0)
A	3.40.630.30	Alpha Beta	3-Layer(aba) Sandwich	Aminopeptidase	Gcn5-related N-acetyltransferase (GNAT)	CATH (4.3.0)
A	3.30.1050.10	Alpha Beta	2-Layer Sandwich	Nonspecific Lipid-transfer Protein	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF13527	Acetyltransferase (GNAT) domain (Acetyltransf_9)	Acetyltransferase (GNAT) domain	This domain catalyses N-acetyltransferase reactions.	Domain
A, B, C, D, E A, B, C, D, E, F	PF13530	Sterol carrier protein domain (SCP2_2)	Sterol carrier protein domain		Domain
A, B, C, D, E A, B, C, D, E, F	PF17668	Acetyltransferase (GNAT) domain (Acetyltransf_17)	Acetyltransferase (GNAT) domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Hypothetical protein	acetyltransferase activity N-acetyltransferase activity acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity catalytic activity N-acyltransferase activity aminoglycoside N-acetyltransferase activity	carbohydrate derivative catabolic process catabolic process aminoglycoside antibiotic catabolic process glycoside metabolic process carbohydrate derivative metabolic process glycosyl compound catabolic process antibiotic catabolic process glycoside catabolic process antibiotic metabolic process metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR025559	Enhanced intracellular survival protein domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR016181	Acyl-CoA N-acyltransferase	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR051554	Acetyltransferase Eis	Family
A, B, C, D, E A, B, C, D, E, F	IPR036527	SCP2 sterol-binding domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR041380	Eis-like, acetyltransferase domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR000182	GNAT domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.