2HQS
Crystal structure of TolB/Pal complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | TolB, C-terminal domain | 8030008 | 4002720 | SCOP2 (2022-06-29) |
A | SCOP2 Family | TolB, N-terminal domain | 8030009 | 4000514 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | YWTD domain-like | 8042387 | 3000494 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | TolB N-terminal domain-like | 8042388 | 3000482 | SCOP2 (2022-06-29) |
C [auth B] | SCOP2B Superfamily | YWTD domain-like | 8042387 | 3000494 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | TolB N-terminal domain-like | 8042388 | 3000482 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | YWTD domain-like | 8042387 | 3000494 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | TolB N-terminal domain-like | 8042388 | 3000482 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | TolB N-terminal domain-like | 8042388 | 3000482 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | YWTD domain-like | 8042387 | 3000494 | SCOP2B (2022-06-29) |
H [auth G] | SCOP2B Superfamily | OmpA-like | 8042389 | 3001650 | SCOP2B (2022-06-29) |
B [auth H] | SCOP2B Superfamily | OmpA-like | 8042389 | 3001650 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2 Family | OmpA-like | 8030010 | 4001470 | SCOP2 (2022-06-29) |
D [auth C] | SCOP2 Superfamily | OmpA-like | 8042389 | 3001650 | SCOP2 (2022-06-29) |
F [auth E] | SCOP2B Superfamily | OmpA-like | 8042389 | 3001650 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DPPIV_N_1 | e2hqsA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 6-bladed | F: DPPIV_N_1 | ECOD (1.6) |
A | TolB_N | e2hqsA2 | A: a/b three-layered sandwiches | X: TolB, N-terminal domain (From Topology) | H: TolB, N-terminal domain (From Topology) | T: TolB, N-terminal domain | F: TolB_N | ECOD (1.6) |
C [auth B] | DPPIV_N_1 | e2hqsB1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 6-bladed | F: DPPIV_N_1 | ECOD (1.6) |
C [auth B] | TolB_N | e2hqsB2 | A: a/b three-layered sandwiches | X: TolB, N-terminal domain (From Topology) | H: TolB, N-terminal domain (From Topology) | T: TolB, N-terminal domain | F: TolB_N | ECOD (1.6) |
E [auth D] | DPPIV_N_1 | e2hqsD1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 6-bladed | F: DPPIV_N_1 | ECOD (1.6) |
E [auth D] | TolB_N | e2hqsD2 | A: a/b three-layered sandwiches | X: TolB, N-terminal domain (From Topology) | H: TolB, N-terminal domain (From Topology) | T: TolB, N-terminal domain | F: TolB_N | ECOD (1.6) |
G [auth F] | DPPIV_N_1 | e2hqsF1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 6-bladed | F: DPPIV_N_1 | ECOD (1.6) |
G [auth F] | TolB_N | e2hqsF2 | A: a/b three-layered sandwiches | X: TolB, N-terminal domain (From Topology) | H: TolB, N-terminal domain (From Topology) | T: TolB, N-terminal domain | F: TolB_N | ECOD (1.6) |
H [auth G] | OmpA | e2hqsG1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
B [auth H] | OmpA | e2hqsH1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
D [auth C] | OmpA | e2hqsC1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
F [auth E] | OmpA | e2hqsE1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B], E [auth D], G [auth F] | PF04052 | TolB amino-terminal domain (TolB_N) | TolB amino-terminal domain | TolB is an essential periplasmic component of the tol-dependent translocation system. This function of this amino terminal domain is uncertain. | Domain |
A, C [auth B], E [auth D], G [auth F] | PF07676 | WD40-like Beta Propeller Repeat (PD40) | WD40-like Beta Propeller Repeat | - | Repeat |
B [auth H], D [auth C], F [auth E], H [auth G] | PF00691 | OmpA family (OmpA) | OmpA family | - | Family |