2H7A

NMR Structure of the Conserved Protein YcgL from Escherichia coli representing the DUF709 Family Reveals a Novel a/b/a Sandwich Fold

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2h7aa1	Alpha and beta proteins (a+b)	YcgL-like	YcgL-like	YcgL-like	Hypothetical protein YcgL	(Escherichia coli CFT073 ) [TaxId: 199310 ],	SCOPe (2.08)
A	d2h7aa2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli CFT073 ) [TaxId: 199310 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	YcgL-like	8021790	4001814	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YcgL-like	8034170	3000422	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF05166	e2h7aA1	A: a+b two layers	X: YcgL/NE1680-like (From Topology)	H: YcgL/NE1680-like (From Topology)	T: YcgL/NE1680-like	F: PF05166	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.510.20	Alpha Beta	Roll	NE1680-like fold	YcgL domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF05166	YcgL domain (YcgL)	YcgL domain	This family of proteins formerly called DUF709 includes the E. coli gene ycgL. Homologues of YcgL are found in gammaproteobacteria. The structure of this protein shows a novel alpha/beta/alpha sandwich structure [1].	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR027354	YcgL domain	Domain
A	IPR038068	YcgL-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.