2CO8
Solution structures of the LIM domain of human NEDD9 interacting protein with calponin homology and LIM domains
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2co8a1 | Small proteins | Glucocorticoid receptor-like (DNA-binding domain) | Glucocorticoid receptor-like (DNA-binding domain) | LIM domain | Nedd9 interacting protein with calponin homology, NICAL (MICAL1) | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d2co8a4 | Artifacts | Tags | Tags | Tags | C-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d2co8a3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | LIM domain | 8026746 | 4003634 | SCOP2 (2022-06-29) |
A | SCOP2 Family | LIM domain | 8026749 | 4003634 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8039125 | 3000068 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8039128 | 3000068 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | LIM_N_5 | e2co8A2 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: LIM_N_5 | ECOD (1.6) |
A | LIM_Mical_like | e2co8A1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: LIM_Mical_like | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.10.110.10 | Mainly Beta | Ribbon | Cysteine Rich Protein | Cysteine Rich Protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00412 | LIM domain (LIM) | LIM domain | This family represents two copies of the LIM structural domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036188 | FAD/NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR050540 | F-actin Monooxygenase Mical | Family | |
IPR001715 | Calponin homology domain | Domain | |
IPR002938 | FAD-binding domain | Domain | |
IPR022735 | bMERB domain | Domain | |
IPR001781 | Zinc finger, LIM-type | Domain | |
IPR036872 | CH domain superfamily | Homologous Superfamily |