1X9F | pdb_00001x9f

Hemoglobin Dodecamer from Lumbricus Erythrocruorin

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d1x9fd_	All alpha proteins	Globin-like	Globin-like	Globins	Extracellular dodecameric hemoglobin (erythrocruorin), subunit D1	(Lumbricus terrestris ) [TaxId: 6398 ],	SCOPe (2.08)
H	d1x9fh_	All alpha proteins	Globin-like	Globin-like	Globins	Extracellular dodecameric hemoglobin (erythrocruorin), subunit D1	(Lumbricus terrestris ) [TaxId: 6398 ],	SCOPe (2.08)
L	d1x9fl_	All alpha proteins	Globin-like	Globin-like	Globins	Extracellular dodecameric hemoglobin (erythrocruorin), subunit D1	(Lumbricus terrestris ) [TaxId: 6398 ],	SCOPe (2.08)
C	d1x9fc_	All alpha proteins	Globin-like	Globin-like	Globins	Extracellular dodecameric hemoglobin (erythrocruorin), subunit III (globin C)	(Lumbricus terrestris ) [TaxId: 6398 ],	SCOPe (2.08)
K	d1x9fk_	All alpha proteins	Globin-like	Globin-like	Globins	Extracellular dodecameric hemoglobin (erythrocruorin), subunit III (globin C)	(Lumbricus terrestris ) [TaxId: 6398 ],	SCOPe (2.08)
G	d1x9fg_	All alpha proteins	Globin-like	Globin-like	Globins	Extracellular dodecameric hemoglobin (erythrocruorin), subunit III (globin C)	(Lumbricus terrestris ) [TaxId: 6398 ],	SCOPe (2.08)
F	d1x9ff_	All alpha proteins	Globin-like	Globin-like	Globins	Extracellular dodecameric hemoglobin (erythrocruorin), subunit II (globin B)	(Lumbricus terrestris ) [TaxId: 6398 ],	SCOPe (2.08)
J	d1x9fj_	All alpha proteins	Globin-like	Globin-like	Globins	Extracellular dodecameric hemoglobin (erythrocruorin), subunit II (globin B)	(Lumbricus terrestris ) [TaxId: 6398 ],	SCOPe (2.08)
B	d1x9fb_	All alpha proteins	Globin-like	Globin-like	Globins	Extracellular dodecameric hemoglobin (erythrocruorin), subunit II (globin B)	(Lumbricus terrestris ) [TaxId: 6398 ],	SCOPe (2.08)
E	d1x9fe_	All alpha proteins	Globin-like	Globin-like	Globins	Extracellular dodecameric hemoglobin (erythrocruorin), subunit IV (globin A)	(Lumbricus terrestris ) [TaxId: 6398 ],	SCOPe (2.08)
I	d1x9fi_	All alpha proteins	Globin-like	Globin-like	Globins	Extracellular dodecameric hemoglobin (erythrocruorin), subunit IV (globin A)	(Lumbricus terrestris ) [TaxId: 6398 ],	SCOPe (2.08)
A	d1x9fa_	All alpha proteins	Globin-like	Globin-like	Globins	Extracellular dodecameric hemoglobin (erythrocruorin), subunit IV (globin A)	(Lumbricus terrestris ) [TaxId: 6398 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2 Family	Globins	8031412	4000551	SCOP2 (2022-06-29)
D	SCOP2 Superfamily	Globin-like	8043790	3000554	SCOP2 (2022-06-29)
H	SCOP2B Superfamily	Globin-like	8043790	3000554	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Globin-like	8043790	3000554	SCOP2B (2022-06-29)
C	SCOP2 Family	Globins	8031411	4000551	SCOP2 (2022-06-29)
C	SCOP2 Superfamily	Globin-like	8043789	3000554	SCOP2 (2022-06-29)
K	SCOP2B Superfamily	Globin-like	8043789	3000554	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Globin-like	8043789	3000554	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Globin-like	8043788	3000554	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Globin-like	8043788	3000554	SCOP2B (2022-06-29)
B	SCOP2 Family	Globins	8031410	4000551	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Globin-like	8043788	3000554	SCOP2 (2022-06-29)
E	SCOP2B Superfamily	Globin-like	8043787	3000554	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Globin-like	8043787	3000554	SCOP2B (2022-06-29)
A	SCOP2 Family	Globins	8031409	4000551	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Globin-like	8043787	3000554	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	e1x9fD1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: p53 tetramerization domain	H: p53 tetramerization domain	T: Cation_efflux	F:	ECOD (20:10:01)
H	e1x9fH1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: p53 tetramerization domain	H: p53 tetramerization domain	T: Cation_efflux	F:	ECOD (20:10:01)
L	e1x9fL1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: p53 tetramerization domain	H: p53 tetramerization domain	T: Cation_efflux	F:	ECOD (20:10:01)
C	e1x9fC1	A: Globin-like	X: Globin-like	H: Globin-like	T: Globin	F:	ECOD (20:10:01)
K	e1x9fK1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: p53 tetramerization domain	H: p53 tetramerization domain	T: Cation_efflux	F:	ECOD (20:10:01)
G	e1x9fG1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: p53 tetramerization domain	H: p53 tetramerization domain	T: Cation_efflux	F:	ECOD (20:10:01)
F	e1x9fF1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: p53 tetramerization domain	H: p53 tetramerization domain	T: Cation_efflux	F:	ECOD (20:10:01)
J	e1x9fJ1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: p53 tetramerization domain	H: p53 tetramerization domain	T: Cation_efflux	F:	ECOD (20:10:01)
B	e1x9fB1	A: Globin-like	X: Globin-like	H: Globin-like	T: Globin	F:	ECOD (20:10:01)
E	e1x9fE1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: p53 tetramerization domain	H: p53 tetramerization domain	T: Cation_efflux	F:	ECOD (20:10:01)
I	e1x9fI1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: p53 tetramerization domain	H: p53 tetramerization domain	T: Cation_efflux	F:	ECOD (20:10:01)
A	e1x9fA1	A: Globin-like	X: Globin-like	H: Globin-like	T: Globin	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
H	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
L	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
C	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
K	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
G	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
F	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
J	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
B	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
E	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
I	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
A	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D, H, L	hemoglobin chain d1	oxygen binding binding small molecule binding oxygen carrier activity molecular carrier activity tetrapyrrole binding heme binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding	-	protein-containing complex cellular anatomical structure intracellular anatomical structure hemoglobin complex cytoplasm cytosol extracellular region
C, G, K	Globin III, extracellular	oxygen binding binding small molecule binding oxygen carrier activity molecular carrier activity tetrapyrrole binding heme binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding	-	protein-containing complex cellular anatomical structure intracellular anatomical structure hemoglobin complex cytoplasm cytosol extracellular region
B, F, J	Globin II, extracellular	oxygen binding binding small molecule binding oxygen carrier activity molecular carrier activity tetrapyrrole binding heme binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding	-	protein-containing complex cellular anatomical structure intracellular anatomical structure hemoglobin complex cytoplasm cytosol extracellular region
A, E, I	Globin IV, extracellular	oxygen binding binding small molecule binding oxygen carrier activity molecular carrier activity tetrapyrrole binding heme binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding	-	protein-containing complex cellular anatomical structure intracellular anatomical structure hemoglobin complex cytoplasm cytosol extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D, H, L	IPR044399	Myoglobin-like, M family globin domain	Domain
D, H, L	IPR014610	Globin, extracellular	Family
D, H, L	IPR009050	Globin-like superfamily	Homologous Superfamily
D, H, L	IPR000971	Globin	Domain
D, H, L	IPR012292	Globin/Protoglobin	Homologous Superfamily
C, G, K	IPR044399	Myoglobin-like, M family globin domain	Domain
C, G, K	IPR014610	Globin, extracellular	Family
C, G, K	IPR009050	Globin-like superfamily	Homologous Superfamily
C, G, K	IPR000971	Globin	Domain
C, G, K	IPR012292	Globin/Protoglobin	Homologous Superfamily
B, F, J	IPR044399	Myoglobin-like, M family globin domain	Domain
B, F, J	IPR014610	Globin, extracellular	Family
B, F, J	IPR002336	Erythrocruorin	Family
B, F, J	IPR009050	Globin-like superfamily	Homologous Superfamily
B, F, J	IPR000971	Globin	Domain
B, F, J	IPR012292	Globin/Protoglobin	Homologous Superfamily
A, E, I	IPR044399	Myoglobin-like, M family globin domain	Domain
A, E, I	IPR014610	Globin, extracellular	Family
A, E, I	IPR009050	Globin-like superfamily	Homologous Superfamily
A, E, I	IPR000971	Globin	Domain
A, E, I	IPR012292	Globin/Protoglobin	Homologous Superfamily