1VYT | pdb_00001vyt

beta3 subunit complexed with aid

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D [auth F]	d1vytf_	Peptides	Fragments of the L-type calcium channel alpha subunit Cav.1 (dihydropyridine receptor)	Fragments of the L-type calcium channel alpha subunit Cav.1 (dihydropyridine receptor)	Fragments of the L-type calcium channel alpha subunit Cav.1 (dihydropyridine receptor)	Fragments of the L-type calcium channel alpha subunit Cav.1 (dihydropyridine receptor)	RAT (Rattus norvegicus ) [TaxId: 10116 ],	SCOPe (2.08)
C [auth E]	d1vyte_	Peptides	Fragments of the L-type calcium channel alpha subunit Cav.1 (dihydropyridine receptor)	Fragments of the L-type calcium channel alpha subunit Cav.1 (dihydropyridine receptor)	Fragments of the L-type calcium channel alpha subunit Cav.1 (dihydropyridine receptor)	Fragments of the L-type calcium channel alpha subunit Cav.1 (dihydropyridine receptor)	RAT (Rattus norvegicus ) [TaxId: 10116 ],	SCOPe (2.08)
B	d1vytb1	All beta proteins	SH3-like barrel	SH3-domain	SH3-domain	SH3-like domain of the L-type calcium channel	RAT (Rattus norvegicus ) [TaxId: 10116 ],	SCOPe (2.08)
B	d1vytb2	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	Nucleotide and nucleoside kinases	Guanylate kinase-like domain of the L-type calcium channel	RAT (Rattus norvegicus ) [TaxId: 10116 ],	SCOPe (2.08)
A	d1vyta1	All beta proteins	SH3-like barrel	SH3-domain	SH3-domain	SH3-like domain of the L-type calcium channel	RAT (Rattus norvegicus ) [TaxId: 10116 ],	SCOPe (2.08)
A	d1vyta2	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	Nucleotide and nucleoside kinases	Guanylate kinase-like domain of the L-type calcium channel	RAT (Rattus norvegicus ) [TaxId: 10116 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	SH3-domain	8058014	3000153	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	P-loop nucleotide/nucleoside kinase-like	8058015	3002021	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	SH3-domain	8058014	3000153	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	P-loop nucleotide/nucleoside kinase-like	8058015	3002021	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e1vytB1	A: Cloacin translocation domain	X: Cloacin translocation domain	H: Cloacin translocation domain	T: KOW, Ribosomal_L26	F:	ECOD (20:10:01)
B		e1vytB2	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: GBP	F:	ECOD (20:10:01)
A		e1vytA1	A: Cloacin translocation domain	X: Cloacin translocation domain	H: Cloacin translocation domain	T: KOW, Ribosomal_L26	F:	ECOD (20:10:01)
A		e1vytA2	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: GBP	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.30.30.40	Mainly Beta	Roll	SH3 type barrels.	SH3 Domains	CATH (4.3.0)
B	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
A	2.30.30.40	Mainly Beta	Roll	SH3 type barrels.	SH3 Domains	CATH (4.3.0)
A	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00625	Guanylate kinase (Guanylate_kin)	Guanylate kinase		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth E], D [auth F]	VOLTAGE-DEPENDENT L-TYPE CALCIUM CHANNEL ALPHA-1C SUBUNIT	calcium channel activity monoatomic cation transmembrane transporter activity voltage-gated calcium channel activity gated channel activity monoatomic ion channel activity voltage-gated channel activity voltage-gated monoatomic ion channel activity voltage-gated monoatomic cation channel activity monoatomic cation channel activity passive transmembrane transporter activity calcium ion transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity high voltage-gated calcium channel activity transporter activity calcium channel activity monoatomic cation transmembrane transporter activity voltage-gated calcium channel activity gated channel activity monoatomic ion channel activity voltage-gated channel activity voltage-gated monoatomic ion channel activity voltage-gated monoatomic cation channel activity monoatomic cation channel activity passive transmembrane transporter activity calcium ion transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity high voltage-gated calcium channel activity transporter activity metal ion transmembrane transporter activity transmembrane transporter activity voltage-gated calcium channel activity involved in cardiac muscle cell action potential protein binding binding translation initiation factor binding calmodulin binding cation binding ion binding metal ion binding small molecule binding protein domain specific binding protein phosphatase binding phosphatase binding enzyme binding protein phosphatase 2A binding cytoskeletal protein binding alpha-actinin binding actinin binding transmembrane transporter binding voltage-gated calcium channel activity involved in AV node cell action potential	membrane depolarization during action potential membrane depolarization biological regulation membrane depolarization during cardiac muscle cell action potential action potential regulation of biological quality cardiac muscle cell action potential regulation of membrane potential heart process multicellular organismal process system process cardiac muscle cell action potential involved in contraction atrial cardiac muscle cell to AV node cell signaling regulation of heart contraction membrane depolarization during action potential membrane depolarization biological regulation membrane depolarization during cardiac muscle cell action potential action potential regulation of biological quality cardiac muscle cell action potential regulation of membrane potential heart process multicellular organismal process system process cardiac muscle cell action potential involved in contraction atrial cardiac muscle cell to AV node cell signaling regulation of heart contraction regulation of system process cardiac muscle contraction striated muscle contraction cell communication circulatory system process actin filament-based process regulation of multicellular organismal process atrial cardiac muscle cell to AV node cell communication cell communication involved in cardiac conduction blood circulation cardiac muscle cell contraction regulation of biological process atrial cardiac muscle cell action potential actin filament-based movement muscle contraction muscle system process regulation of blood circulation membrane depolarization during atrial cardiac muscle cell action potential cardiac conduction cellular process actin-mediated cell contraction heart contraction developmental process multicellular organism development nerve development cranial nerve development anatomical structure development optic nerve development nervous system development system development heart development animal organ development circulatory system development regulation of blood pressure limb development appendage development embryonic forelimb morphogenesis embryonic limb morphogenesis embryonic morphogenesis embryonic appendage morphogenesis embryo development anatomical structure morphogenesis forelimb morphogenesis appendage morphogenesis limb morphogenesis regulated exocytosis transport secretion export from cell establishment of localization vesicle-mediated transport localization secretion by cell exocytosis calcium-ion regulated exocytosis regulation of cellular process regulation of membrane depolarization positive regulation of biological process positive regulation of membrane depolarization regulation of actin filament-based process regulation of ventricular cardiac muscle cell action potential regulation of cardiac muscle cell action potential regulation of action potential ventricular cardiac muscle cell action potential regulation of cardiac muscle contraction regulation of muscle system process regulation of striated muscle contraction regulation of actin filament-based movement regulation of muscle contraction regulation of cardiac muscle cell contraction regulation of tube diameter regulation of tube size regulation of vasoconstriction vascular process in circulatory system blood vessel diameter maintenance vasoconstriction regulation of anatomical structure size inorganic ion homeostasis intracellular calcium ion homeostasis homeostatic process calcium ion homeostasis cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis positive regulation of adenylate cyclase activity positive regulation of molecular function regulation of molecular function positive regulation of cyclase activity regulation of adenylate cyclase activity regulation of catalytic activity positive regulation of catalytic activity positive regulation of lyase activity plasma membrane bounded cell projection organization cellular developmental process cell projection organization cell development neuron projection development axon development cellular component organization generation of neurons neurogenesis neuron differentiation cell differentiation neuron development cellular component organization or biogenesis excretion micturition renal system process smooth muscle contraction involved in micturition urinary bladder smooth muscle contraction smooth muscle contraction urinary tract smooth muscle contraction monoatomic ion transmembrane transport calcium ion transport metal ion transport monoatomic cation transmembrane transport transmembrane transport monoatomic ion transport monoatomic cation transport calcium ion transmembrane transport head development forebrain development brain development pallium development cerebral cortex development central nervous system development telencephalon development calcium ion import trans-synaptic signaling synaptic signaling signaling anterograde trans-synaptic signaling cell-cell signaling chemical synaptic transmission cellular response to stimulus regulation of calcium ion transport regulation of localization response to stimulus sarcoplasmic reticulum calcium ion transport release of sequestered calcium ion into cytosol by sarcoplasmic reticulum intracellular signal transduction intracellular signaling cassette signal transduction release of sequestered calcium ion into cytosol by endoplasmic reticulum regulation of release of sequestered calcium ion into cytosol regulation of monoatomic ion transport release of sequestered calcium ion into cytosol regulation of transmembrane transport calcium-mediated signaling regulation of monoatomic ion transmembrane transport regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion regulation of calcium ion transmembrane transport regulation of metal ion transport calcium ion transmembrane import into cytosol regulation of cardiac muscle contraction by calcium ion signaling regulation of transport regulation of monoatomic cation transmembrane transport regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum adult walking behavior adult locomotory behavior behavior adult behavior locomotory behavior walking behavior response to nutrient levels establishment of protein localization nitrogen compound transport hormone secretion protein localization to extracellular region peptide secretion signal release intracellular protein localization regulation of hormone levels establishment of protein localization to extracellular region protein secretion peptide transport protein transport peptide hormone secretion macromolecule localization hormone transport insulin secretion glucose homeostasis carbohydrate homeostasis regulation of heart rate by cardiac conduction regulation of heart rate corpus callosum development positive regulation of cytosolic calcium ion concentration calcium ion transport into cytosol immune system development immune system process AV node cell action potential membrane depolarization during AV node cell action potential AV node cell to bundle of His cell signaling AV node cell to bundle of His cell communication calcium ion transmembrane transport via high voltage-gated calcium channel positive regulation of cation transmembrane transport positive regulation of calcium ion transport regulation of calcium ion transmembrane transport via high voltage-gated calcium channel positive regulation of monoatomic ion transport positive regulation of calcium ion transmembrane transport positive regulation of transmembrane transport positive regulation of monoatomic ion transmembrane transport positive regulation of cellular process positive regulation of calcium ion transmembrane transport via high voltage-gated calcium channel positive regulation of transport sensory organ development eye development visual system development camera-type eye development sensory system development response to light stimulus learning learning or memory nervous system process visual learning visual behavior cognition associative learning response to radiation response to abiotic stimulus cellular localization establishment of localization in cell import into cell import across plasma membrane inorganic cation import across plasma membrane calcium ion import across plasma membrane inorganic ion import across plasma membrane calcium ion import into cytosol regulation of growth regulation of developmental growth regulation of developmental process developmental growth growth organ growth regulation of organ growth growth hormone secretion positive regulation of cell communication positive regulation of establishment of protein localization positive regulation of insulin secretion regulation of peptide hormone secretion positive regulation of peptide hormone secretion regulation of protein secretion regulation of secretion positive regulation of protein localization regulation of hormone secretion regulation of protein localization regulation of peptide secretion positive regulation of secretion by cell positive regulation of protein transport regulation of secretion by cell positive regulation of hormone secretion positive regulation of secretion positive regulation of peptide secretion regulation of signaling regulation of peptide transport regulation of establishment of protein localization regulation of protein transport positive regulation of protein secretion regulation of insulin secretion regulation of cell communication positive regulation of signaling cellular response to nitrogen compound response to oxygen-containing compound response to nitrogen compound cellular response to amyloid-beta cellular response to oxygen-containing compound cellular response to chemical stimulus response to chemical response to amyloid-beta response to alcohol	protein-containing complex plasma membrane protein complex sarcolemma voltage-gated calcium channel complex plasma membrane membrane membrane protein complex cation channel complex transporter complex cell periphery cellular anatomical structure transmembrane transporter complex T-tubule L-type voltage-gated calcium channel complex protein-containing complex plasma membrane protein complex sarcolemma voltage-gated calcium channel complex plasma membrane membrane membrane protein complex cation channel complex transporter complex cell periphery cellular anatomical structure transmembrane transporter complex T-tubule L-type voltage-gated calcium channel complex calcium channel complex monoatomic ion channel complex postsynaptic specialization membrane postsynaptic specialization synapse postsynaptic density membrane synaptic membrane postsynaptic density postsynapse neuron to neuron synapse organelle cell junction postsynaptic membrane asymmetric synapse plasma membrane region somatodendritic compartment cell body perikaryon neuronal cell body intracellular anatomical structure intracellular membraneless organelle Z disc sarcomere intracellular organelle I band membraneless organelle contractile muscle fiber cytoplasm supramolecular fiber myofibril supramolecular polymer supramolecular complex presynapse presynaptic membrane basal part of cell basal plasma membrane basolateral plasma membrane cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection glutamatergic synapse cell pole basal pole of outer hair cell dendritic shaft axon neuron projection cytoplasm axon cytoplasm membrane-bounded organelle cilium cell surface nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen neuron projection terminus membrane raft caveolar macromolecular signaling complex plasma membrane raft caveola membrane microdomain
A, B	CALCIUM CHANNEL BETA-3 SUBUNIT	calcium channel activity monoatomic cation transmembrane transporter activity voltage-gated calcium channel activity gated channel activity monoatomic ion channel activity voltage-gated channel activity voltage-gated monoatomic ion channel activity voltage-gated monoatomic cation channel activity monoatomic cation channel activity passive transmembrane transporter activity calcium ion transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity high voltage-gated calcium channel activity transporter activity calcium channel activity monoatomic cation transmembrane transporter activity voltage-gated calcium channel activity gated channel activity monoatomic ion channel activity voltage-gated channel activity voltage-gated monoatomic ion channel activity voltage-gated monoatomic cation channel activity monoatomic cation channel activity passive transmembrane transporter activity calcium ion transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity high voltage-gated calcium channel activity transporter activity metal ion transmembrane transporter activity transmembrane transporter activity channel regulator activity ion channel regulator activity calcium channel regulator activity molecular function regulator activity transporter regulator activity protein binding binding kinase binding enzyme binding protein kinase binding	cellular response to stimulus positive regulation of cell communication multicellular organismal process regulation of postsynaptic membrane potential system process regulation of cellular process positive regulation of signal transduction response to stimulus signaling modulation of chemical synaptic transmission regulation of system process positive regulation of excitatory postsynaptic potential positive regulation of biological process regulation of signal transduction chemical synaptic transmission, postsynaptic cellular response to stimulus positive regulation of cell communication multicellular organismal process regulation of postsynaptic membrane potential system process regulation of cellular process positive regulation of signal transduction response to stimulus signaling modulation of chemical synaptic transmission regulation of system process positive regulation of excitatory postsynaptic potential positive regulation of biological process regulation of signal transduction chemical synaptic transmission, postsynaptic cell communication positive regulation of response to stimulus synaptic signaling modulation of excitatory postsynaptic potential regulation of multicellular organismal process signal transduction regulation of biological quality positive regulation of cellular process trans-synaptic signaling regulation of biological process regulation of signaling cell surface receptor signaling pathway nervous system process biological regulation cell-cell signaling chemical synaptic transmission regulation of nervous system process regulation of trans-synaptic signaling regulation of response to stimulus anterograde trans-synaptic signaling regulation of cell communication cellular process excitatory postsynaptic potential regulation of membrane potential positive regulation of signaling calcium ion transmembrane import into cytosol transport monoatomic ion transmembrane transport positive regulation of cytosolic calcium ion concentration establishment of localization calcium ion transport metal ion transport monoatomic cation transmembrane transport transmembrane transport localization monoatomic ion transport monoatomic cation transport calcium ion transport into cytosol calcium ion transmembrane transport regulation of action potential regulation of membrane repolarization during action potential membrane repolarization regulation of membrane repolarization action potential membrane repolarization during action potential immune response-regulating cell surface receptor signaling pathway immune response-activating signaling pathway immune response-regulating signaling pathway positive regulation of immune response regulation of immune system process positive regulation of immune system process immune response-activating cell surface receptor signaling pathway immune response T cell receptor signaling pathway immune system process regulation of immune response antigen receptor-mediated signaling pathway activation of immune response detection of external stimulus detection of mechanical stimulus involved in sensory perception of pain response to mechanical stimulus response to external stimulus sensory perception of pain detection of mechanical stimulus involved in sensory perception sensory perception of mechanical stimulus detection of abiotic stimulus detection of stimulus sensory perception detection of mechanical stimulus response to abiotic stimulus detection of stimulus involved in sensory perception regulation of membrane hyperpolarization membrane hyperpolarization calcium ion transmembrane transport via high voltage-gated calcium channel response to decreased oxygen levels cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels cellular response to chemical stimulus cellular response to stress response to hypoxia response to stress response to chemical response to oxygen levels protein localization to cell periphery cellular localization protein localization to plasma membrane macromolecule localization intracellular protein localization localization within membrane protein localization to membrane regulation of localization positive regulation of cation transmembrane transport positive regulation of voltage-gated calcium channel activity regulation of transmembrane transporter activity regulation of monoatomic ion transmembrane transport regulation of voltage-gated calcium channel activity positive regulation of molecular function positive regulation of monoatomic ion transport positive regulation of transmembrane transport positive regulation of monoatomic ion transmembrane transport positive regulation of high voltage-gated calcium channel activity regulation of transport regulation of monoatomic ion transport positive regulation of cation channel activity regulation of molecular function regulation of transmembrane transport positive regulation of transport positive regulation of transporter activity positive regulation of ion transmembrane transporter activity regulation of monoatomic cation transmembrane transport negative regulation of nervous system process regulation of response to external stimulus negative regulation of detection of mechanical stimulus involved in sensory perception of touch negative regulation of biological process detection of mechanical stimulus involved in sensory perception of touch sensory perception of touch negative regulation of response to stimulus negative regulation of response to external stimulus negative regulation of multicellular organismal process establishment of protein localization regulation of protein localization protein targeting positive regulation of establishment of protein localization regulation of protein targeting to membrane establishment of protein localization to membrane regulation of establishment of protein localization protein targeting to membrane regulation of cellular localization regulation of protein targeting positive regulation of protein targeting to membrane	protein-containing complex plasma membrane protein complex sarcolemma voltage-gated calcium channel complex plasma membrane membrane membrane protein complex cation channel complex transporter complex cell periphery cellular anatomical structure transmembrane transporter complex T-tubule L-type voltage-gated calcium channel complex protein-containing complex plasma membrane protein complex sarcolemma voltage-gated calcium channel complex plasma membrane membrane membrane protein complex cation channel complex transporter complex cell periphery cellular anatomical structure transmembrane transporter complex T-tubule L-type voltage-gated calcium channel complex calcium channel complex monoatomic ion channel complex apical part of cell plasma membrane region apical plasma membrane intracellular anatomical structure cytoplasm synapse cell junction

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth E], D [auth F]	IPR005446	Voltage-dependent calcium channel, L-type, alpha-1 subunit	Family
C [auth E], D [auth F]	IPR014873	Voltage-dependent calcium channel, alpha-1 subunit, IQ domain	Domain
C [auth E], D [auth F]	IPR002077	Voltage-dependent calcium channel, alpha-1 subunit	Family
C [auth E], D [auth F]	IPR031649	Voltage-dependent L-type calcium channel, IQ-associated domain	Domain
C [auth E], D [auth F]	IPR005451	Voltage-dependent calcium channel, L-type, alpha-1C subunit	Family
C [auth E], D [auth F]	IPR005821	Ion transport domain	Domain
C [auth E], D [auth F]	IPR050599	Voltage-dependent calcium channel alpha-1 subunit	Family
C [auth E], D [auth F]	IPR031688	Voltage-gated calcium channel subunit alpha, C-terminal	Domain
C [auth E], D [auth F]	IPR027359	Voltage-dependent channel domain superfamily	Homologous Superfamily
A, B	IPR008145	Guanylate kinase/L-type calcium channel beta subunit	Domain
A, B	IPR036028	SH3-like domain superfamily	Homologous Superfamily
A, B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, B	IPR000584	Voltage-dependent calcium channel, L-type, beta subunit	Family
A, B	IPR001452	SH3 domain	Domain
A, B	IPR035760	Voltage-dependent L-type calcium channel subunit beta-3, SH3 domain	Domain
A, B	IPR046937	Voltage-dependent L-type calcium channel subunit beta-1-4, N-terminal A domain	Domain
A, B	IPR008079	Voltage-dependent calcium channel, L-type, beta-3 subunit	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.