Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1viba_ Small proteins Toxic hairpin Neurotoxin B-IV Neurotoxin B-IV Neurotoxin B-IV (Cerebratulus lacteus ) [TaxId: 6221 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyNeurotoxin B-IV8025761 4003033 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyNeurotoxin B-IV8038140 3000187 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF07822e1vibA1 A: few secondary structure elementsX: Toxic hairpinH: Neurotoxin B-IV (From Topology)T: Neurotoxin B-IVF: PF07822ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.287.120 Mainly Alpha Orthogonal Bundle Helix Hairpins Neurotoxin B-IV-likeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF07822Neurotoxin B-IV-like protein (Toxin_13)Neurotoxin B-IV-like proteinThe members of this family resemble neurotoxin B-IV (Swiss:P01525), which is a crustacean-selective neurotoxin produced by the marine worm Cerebratulus lacteus. This highly cationic peptide is approximately 55 residues and is arranged to form two ant ...The members of this family resemble neurotoxin B-IV (Swiss:P01525), which is a crustacean-selective neurotoxin produced by the marine worm Cerebratulus lacteus. This highly cationic peptide is approximately 55 residues and is arranged to form two antiparallel helices connected by a well-defined loop in a hairpin structure. The branches of the hairpin are linked by four disulphide bonds. Three residues identified as being important for activity, namely Arg-17, -25 and -34, are found on the same face of the molecule, while another residue important for activity, Trp30, is on the opposite side. The protein's mode of action is not entirely understood, but it may act on voltage-gated sodium channels, possibly by binding to an as yet uncharacterised site on these proteins. Its site of interaction may also be less specific, for example it may interact with negatively charged membrane lipids [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036586Neurotoxin B-IV-like superfamilyHomologous Superfamily
IPR012497Neurotoxin B-IV-likeFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
HYP Parent Component: PRO

RESIDAA0030

PSI-MOD :  4-hydroxy-L-proline MOD:00039