X-ray Structure of the R70D PI-PLC enzyme: Insight into the role of calcium and surrounding amino acids on active site geometry and catalysis.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d1t6ma_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | PLC-like phosphodiesterases | Bacterial PLC | automated matches | (Bacillus thuringiensis ) [TaxId: 1428 ], | SCOPe (2.08) |
| B | d1t6mb_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | PLC-like phosphodiesterases | Bacterial PLC | automated matches | (Bacillus thuringiensis ) [TaxId: 1428 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | Bacterial PLC | 8077543 | 4003334 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | PLC-like phosphodiesterases | 8077544 | 3000615 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | PLC-like phosphodiesterases | 8077544 | 3000615 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | CH | e1t6mA1 | A: a/b three-layered sandwiches | X: Globin-like | H: Globin-like | T: Globin-like | F: CH | ECOD (v294.1) |
| B | Sigma_1_2 | e1t6mB1 | A: a/b three-layered sandwiches | X: HTH | H: Nudix | T: winged helix domain | F: Sigma_1_2 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.20.20.190 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Phosphatidylinositol (PI) phosphodiesterase | CATH (4.3.0) |
| B | 3.20.20.190 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Phosphatidylinositol (PI) phosphodiesterase | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| 1-phosphatidylinositol phosphodiesterase |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR000909 | Phosphatidylinositol-specific phospholipase C, X domain | Domain | |
| IPR051057 | Phosphoinositide phospholipase C domain-containing protein | Family | |
| IPR017946 | PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Monotopic/peripheral | Alpha/Beta monotopic/peripheral | PLC-like phosphodiesterases | Phosphatidylinositol-specific phospholipase C |
