Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1syqa1 All alpha proteins Four-helical up-and-down bundle alpha-catenin/vinculin-like alpha-catenin/vinculin Vinculin human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ad1syqa3 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 Familyalpha-Catenin/Vinculin8027423 4000832 SCOP2 (2022-06-29)
ASCOP2 Familyalpha-Catenin/Vinculin8027424 4000832 SCOP2 (2022-06-29)
ASCOP2 Superfamilyalpha-Catenin/Vinculin-like8039802 3001619 SCOP2 (2022-06-29)
ASCOP2 Superfamilyalpha-Catenin/Vinculin-like8039803 3001619 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AVinculin_1ste1syqA1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-catenin-relatedT: alpha-catenin/vinculinF: Vinculin_1stECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.120.230 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Alpha-catenin/vinculin-likeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01044Vinculin family (Vinculin)Vinculin family- Family
PF09141Talin, middle domain (Talin_middle)Talin, middle domainMembers of this family adopt a structure consisting of five alpha helices that fold into a bundle. They contain a Vinculin binding site (VBS) composed of a hydrophobic surface spanning five turns of helix four. Activation of the VBS causes subsequent ...Members of this family adopt a structure consisting of five alpha helices that fold into a bundle. They contain a Vinculin binding site (VBS) composed of a hydrophobic surface spanning five turns of helix four. Activation of the VBS causes subsequent recruitment of Vinculin, which enables maturation of small integrin/talin complexes into more stable adhesions. Formation of the complex between VBS and Vinculin requires prior unfolding of this middle domain: once released from the talin hydrophobic core, the VBS helix is then available to induce the 'bundle conversion' conformational change within the vinculin head domain thereby displacing the intramolecular interaction with the vinculin tail, allowing vinculin to bind actin [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
vinculin isoform VCL
Talin 1