1R6F | pdb_00001r6f

The structure of Yersinia pestis V-antigen, an essential virulence factor and mediator of immunity against plague

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1r6fa_ Multi-domain proteins (alpha and beta) Virulence-associated V antigen Virulence-associated V antigen Virulence-associated V antigen Low calcium response locus protein V, LcrV (Yersinia pestis ) [TaxId: 632 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyLcrV-like 8028016 4001653 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyLcrV-like 8040395 3000203 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALcrVe1r6fA1 A: alpha bundlesX: Alpha-helical domain in virulence-associated V antigenH: Alpha-helical domain in virulence-associated V antigenT: Alpha-helical domain in virulence-associated V antigenF: LcrVECOD (v294.1)
ALcrVe1r6fA2 A: few secondary structure elementsX: a+b domain in virulence-associated V antigenH: a+b domain in virulence-associated V antigenT: a+b domain in virulence-associated V antigenF: LcrVECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Virulence-associated V antigen- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036139Virulence-associated V antigen superfamilyHomologous Superfamily
IPR005413Low calcium response V antigenFamily