1DKD
CRYSTAL STRUCTURE OF A GROEL (APICAL DOMAIN) AND A DODECAMERIC PEPTIDE COMPLEX
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1dkda_ | Alpha and beta proteins (a/b) | The 'swivelling' beta/beta/alpha domain | GroEL apical domain-like | GroEL-like chaperone, apical domain | GroEL, A domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
C [auth B] | d1dkdb_ | Alpha and beta proteins (a/b) | The 'swivelling' beta/beta/alpha domain | GroEL apical domain-like | GroEL-like chaperone, apical domain | GroEL, A domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
E [auth C] | d1dkdc_ | Alpha and beta proteins (a/b) | The 'swivelling' beta/beta/alpha domain | GroEL apical domain-like | GroEL-like chaperone, apical domain | GroEL, A domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
G [auth D] | d1dkdd_ | Alpha and beta proteins (a/b) | The 'swivelling' beta/beta/alpha domain | GroEL apical domain-like | GroEL-like chaperone, apical domain | GroEL, A domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
E [auth C] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
G [auth D] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Cpn60_TCP1_2nd_2 | e1dkdA1 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd_2 | ECOD (1.6) |
C [auth B] | Cpn60_TCP1_2nd_2 | e1dkdB1 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd_2 | ECOD (1.6) |
E [auth C] | Cpn60_TCP1_2nd_2 | e1dkdC1 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd_2 | ECOD (1.6) |
G [auth D] | Cpn60_TCP1_2nd_2 | e1dkdD1 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (4.3.0) |
C [auth B] | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (4.3.0) |
E [auth C] | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (4.3.0) |
G [auth D] | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth B], E [auth C], G [auth D] | IPR027413 | GroEL-like equatorial domain superfamily | Homologous Superfamily |
A, C [auth B], E [auth C], G [auth D] | IPR027410 | TCP-1-like chaperonin intermediate domain superfamily | Homologous Superfamily |
A, C [auth B], E [auth C], G [auth D] | IPR001844 | Chaperonin Cpn60/GroEL | Family |
A, C [auth B], E [auth C], G [auth D] | IPR018370 | Chaperonin Cpn60, conserved site | Conserved Site |
A, C [auth B], E [auth C], G [auth D] | IPR027409 | GroEL-like apical domain superfamily | Homologous Superfamily |
A, C [auth B], E [auth C], G [auth D] | IPR002423 | Chaperonin Cpn60/GroEL/TCP-1 family | Family |