Annotations: 6ZZ6

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	ABC transporter-like P-loop ATPases	8056734	3002020	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	KOG0964	e6zz6B1	A: alpha bundles	X: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)	H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)	T: Helical domain in structural maintenance of chromosomes protein 3	F: KOG0964	ECOD (1.6)
B	SMC_N	e6zz6B2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: SMC_N	ECOD (1.6)
C	Rad21_Rec8	e6zz6C1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: Rad21_Rec8	ECOD (1.6)
C	Rad21_Rec8_N	e6zz6C2	A: alpha bundles	X: Mitotic chromosome determinant-related protein N-terminal domain (From Topology)	H: Mitotic chromosome determinant-related protein N-terminal domain (From Topology)	T: Mitotic chromosome determinant-related protein N-terminal domain	F: Rad21_Rec8_N	ECOD (1.6)
D	Nipped-B_C	e6zz6D1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Nipped-B_C	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF02463	RecF/RecN/SMC N terminal domain (SMC_N)	RecF/RecN/SMC N terminal domain	This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. T ...	This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics [1]. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.	Domain
B	PF02463	RecF/RecN/SMC N terminal domain (SMC_N)	RecF/RecN/SMC N terminal domain	This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. T ...	This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics [1]. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.	Domain
C	PF04824	Conserved region of Rad21 / Rec8 like protein (Rad21_Rec8)	Conserved region of Rad21 / Rec8 like protein	-	Family
D	PF12765	HEAT repeat associated with sister chromatid cohesion (Cohesin_HEAT)	HEAT repeat associated with sister chromatid cohesion	-	Repeat
D	PF12830	Sister chromatid cohesion C-terminus (Nipped-B_C)	Sister chromatid cohesion C-terminus	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Structural maintenance of chromosomes protein 1,Structural maintenance of chromosomes protein 1,Structural maintenance of chromosomes protein 1	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding nucleic acid binding double-stranded DNA binding DNA secondary structure binding minor groove of adenine-thymine-rich DNA binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity identical protein binding protein binding	cellular process cell division cellular component organization organelle organization mitotic sister chromatid cohesion chromosome organization sister chromatid cohesion cellular component organization or biogenesis cell cycle cell cycle process establishment of meiotic sister chromatid cohesion establishment of sister chromatid cohesion meiotic sister chromatid cohesion cellular response to stimulus cellular process cell division cellular component organization organelle organization mitotic sister chromatid cohesion chromosome organization sister chromatid cohesion cellular component organization or biogenesis cell cycle cell cycle process establishment of meiotic sister chromatid cohesion establishment of sister chromatid cohesion meiotic sister chromatid cohesion cellular response to stimulus double-strand break repair response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process cellular response to stress DNA damage response response to stress metabolic process macromolecule metabolic process DNA repair mitotic nuclear division organelle fission sister chromatid segregation mitotic cell cycle nuclear division mitotic cell cycle process mitotic sister chromatid segregation nuclear chromosome segregation chromosome segregation establishment of mitotic sister chromatid cohesion	intracellular organelle protein-containing complex intracellular anatomical structure organelle intracellular non-membrane-bounded organelle chromosome cellular anatomical entity non-membrane-bounded organelle cohesin complex meiotic cohesin complex mitotic cohesin complex membrane-bounded organelle nucleus intracellular membrane-bounded organelle
B	Structural maintenance of chromosomes protein 3,Structural maintenance of chromosomes protein 3,Structural maintenance of chromosomes protein 3	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding double-stranded DNA binding nucleic acid binding protein binding kinase binding enzyme binding protein kinase binding cohesin loader activity catalytic activity, acting on DNA catalytic activity, acting on a nucleic acid catalytic activity pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides ATP-dependent activity identical protein binding	cellular component organization organelle organization chromosome organization sister chromatid cohesion cellular process cellular component organization or biogenesis cell cycle meiotic sister chromatid cohesion cell cycle process cellular response to stimulus double-strand break repair response to stimulus DNA recombination primary metabolic process cellular component organization organelle organization chromosome organization sister chromatid cohesion cellular process cellular component organization or biogenesis cell cycle meiotic sister chromatid cohesion cell cycle process cellular response to stimulus double-strand break repair response to stimulus DNA recombination primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process replication-born double-strand break repair via sister chromatid exchange cellular response to stress DNA damage response response to stress recombinational repair metabolic process macromolecule metabolic process double-strand break repair via homologous recombination DNA repair homologous recombination sexual reproduction reproductive process meiotic cell cycle process meiosis I meiotic nuclear division reciprocal homologous recombination meiotic cell cycle organelle fission reciprocal meiotic recombination nuclear division meiosis I cell cycle process cell division mitotic sister chromatid cohesion meiotic chromosome segregation synaptonemal complex assembly cellular component biogenesis cellular component assembly synaptonemal complex organization chromosome segregation chromosome organization involved in meiotic cell cycle homologous chromosome pairing at meiosis nuclear chromosome segregation homologous chromosome segregation establishment of meiotic sister chromatid cohesion establishment of sister chromatid cohesion establishment of mitotic sister chromatid cohesion mitotic cell cycle mitotic cell cycle process	intracellular organelle protein-containing complex intracellular anatomical structure organelle intracellular non-membrane-bounded organelle chromosome cellular anatomical entity meiotic cohesin complex non-membrane-bounded organelle cohesin complex mitotic cohesin complex membrane-bounded organelle nucleus intracellular membrane-bounded organelle
C	Sister chromatid cohesion protein 1,Sister chromatid cohesion protein 1,Sister chromatid cohesion protein 1	protein binding binding kinase binding enzyme binding protein kinase binding protein-containing complex binding chromatin binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process double-strand break repair DNA recombination primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process double-strand break repair DNA recombination primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process replication-born double-strand break repair via sister chromatid exchange recombinational repair metabolic process macromolecule metabolic process double-strand break repair via homologous recombination DNA repair protein acetylation organonitrogen compound metabolic process macromolecule modification protein metabolic process protein modification process protein acylation cell division cellular component organization organelle organization mitotic sister chromatid cohesion chromosome organization sister chromatid cohesion cellular component organization or biogenesis cell cycle cell cycle process apoptotic process cell death programmed cell death mitotic nuclear division mitotic chromosome condensation organelle fission sister chromatid segregation mitotic cell cycle nuclear division mitotic cell cycle process chromosome condensation mitotic sister chromatid segregation nuclear chromosome segregation chromosome segregation establishment of mitotic sister chromatid cohesion establishment of sister chromatid cohesion	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle condensed nuclear chromosome nucleus membrane-enclosed lumen nuclear chromosome chromosome intracellular organelle lumen membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle condensed nuclear chromosome nucleus membrane-enclosed lumen nuclear chromosome chromosome intracellular organelle lumen organelle lumen intracellular non-membrane-bounded organelle condensed chromosome non-membrane-bounded organelle nuclear lumen chromosome, centromeric region chromosomal region protein-containing complex cohesin complex mitotic cohesin complex
D	Sister chromatid cohesion protein 2	protein-containing complex binding chromatin binding binding sequence-specific DNA binding DNA binding organic cyclic compound binding nucleic acid binding	cellular response to stimulus double-strand break repair response to stimulus DNA recombination primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process replication-born double-strand break repair via sister chromatid exchange cellular response to stress DNA damage response response to stress cellular response to stimulus double-strand break repair response to stimulus DNA recombination primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process replication-born double-strand break repair via sister chromatid exchange cellular response to stress DNA damage response response to stress recombinational repair metabolic process cellular process macromolecule metabolic process double-strand break repair via homologous recombination DNA repair cellular component organization organelle organization chromosome organization cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery protein localization localization protein localization to chromatin cellular localization protein localization to chromosome protein localization to organelle cellular macromolecule localization macromolecule localization regulation of biosynthetic process regulation of biological process regulation of cellular process cellular biosynthetic process cellular metabolic process biological regulation regulation of cellular metabolic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process organic substance biosynthetic process regulation of macromolecule biosynthetic process regulation of metabolic process mitotic nuclear division mitotic chromosome condensation organelle fission sister chromatid segregation mitotic cell cycle nuclear division mitotic cell cycle process chromosome condensation mitotic sister chromatid segregation nuclear chromosome segregation cell cycle chromosome segregation cell cycle process rDNA chromatin condensation protein-containing complex organization nucleolar chromatin organization protein-DNA complex organization nucleus organization nucleolus organization chromatin organization mitotic sister chromatid cohesion establishment of mitotic sister chromatid cohesion sister chromatid cohesion establishment of sister chromatid cohesion cohesin loading mitotic cohesin loading tRNA gene clustering establishment of protein localization establishment of protein localization to chromatin establishment of localization establishment of protein localization to organelle establishment of protein localization to chromosome	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle cellular anatomical entity intracellular organelle SMC loading complex Scc2-Scc4 cohesin loading complex organelle cytoplasm cytosol intracellular non-membrane-bounded organelle membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle cellular anatomical entity intracellular organelle SMC loading complex Scc2-Scc4 cohesin loading complex organelle cytoplasm cytosol intracellular non-membrane-bounded organelle chromosome, centromeric region chromosome chromosomal region non-membrane-bounded organelle protein-DNA complex chromatin 2-micrometer circle DNA extrachromosomal circular DNA extrachromosomal DNA
E [auth F]	DNA (34-MER)	-	-	-
F [auth G]	DNA (34-MER)	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR010935	SMCs flexible hinge	Domain
A	IPR036277	SMCs flexible hinge superfamily	Homologous Superfamily
A	IPR003395	RecF/RecN/SMC, N-terminal	Domain
A	IPR024704	Structural maintenance of chromosomes protein	Family
A	IPR028468	Smc1, ATP-binding cassette domain	Domain
A	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B	IPR041741	Structural maintenance of chromosomes 3, ABC domain, eukaryotic	Domain
B	IPR010935	SMCs flexible hinge	Domain
B	IPR036277	SMCs flexible hinge superfamily	Homologous Superfamily
B	IPR003395	RecF/RecN/SMC, N-terminal	Domain
B	IPR024704	Structural maintenance of chromosomes protein	Family
B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
C	IPR039781	Rad21/Rec8-like protein	Family
C	IPR006910	Rad21/Rec8-like protein, N-terminal	Domain
C	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
C	IPR023093	ScpA-like, C-terminal	Homologous Superfamily
C	IPR006909	Rad21/Rec8-like protein, C-terminal, eukaryotic	Domain
D	IPR033031	Scc2/Nipped-B family	Family
D	IPR016024	Armadillo-type fold	Homologous Superfamily
D	IPR024986	Sister chromatid cohesion C-terminal domain	Domain
D	IPR026003	HEAT repeat associated with sister chromatid cohesion protein	Repeat