Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyARM repeat-like 8039143 3000116 SCOP2B (2022-06-29)
B [auth S]SCOP2 FamilyClathrin coat assembly domain 8098747 4002754 SCOP2 (2022-06-29)
B [auth S]SCOP2 SuperfamilySNARE-like 8098748 3001113 SCOP2 (2022-06-29)
C [auth N]SCOP2B SuperfamilyRegulatory factor Nef 8086596 3000353 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyARM repeat-like 8039144 3000116 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AAdaptin_Ne6uriA1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: Adaptin_NECOD (1.6)
B [auth S]Clat_adaptor_se6uriS1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: Clat_adaptor_sECOD (1.6)
C [auth N]F-proteine6uriN1 A: a+b three layersX: Regulatory factor Nef (From Topology)H: Regulatory factor Nef (From Topology)T: Regulatory factor NefF: F-proteinECOD (1.6)
D [auth B]Adaptin_Ne6uriB1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: Adaptin_NECOD (1.6)
E [auth M]Clat_adaptor_se6uriM1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: Clat_adaptor_sECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01602Adaptin N terminal region (Adaptin_N)Adaptin N terminal region- Repeat
B [auth S]PF01217Clathrin adaptor complex small chain (Clat_adaptor_s)Clathrin adaptor complex small chain- Domain
E [auth M]PF01217Clathrin adaptor complex small chain (Clat_adaptor_s)Clathrin adaptor complex small chain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
AP-2 complex subunit alpha
B [auth S]AP-2 complex subunit sigma
C [auth N]Protein Nef
D [auth B]AP-2 complex subunit beta
E [auth M]AP-2 complex subunit mu
F [auth D]cDNA FLJ50658, highly similar to T-cell surface glycoprotein CD4

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR016024Armadillo-type foldHomologous Superfamily
IPR003164Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomainDomain
IPR011989Armadillo-like helicalHomologous Superfamily
IPR012295TBP domain superfamilyHomologous Superfamily
IPR002553Clathrin/coatomer adaptor, adaptin-like, N-terminalDomain
IPR013041Clathrin adaptor, appendage, Ig-like subdomain superfamilyHomologous Superfamily
IPR050840Adaptor Complexes Large SubunitFamily
IPR008152Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainDomain
IPR017104Adaptor protein complex AP-2, alpha subunitFamily
IPR009028Coatomer/calthrin adaptor appendage, C-terminal subdomainHomologous Superfamily
B [auth S]IPR016635Adaptor protein complex, sigma subunitFamily
B [auth S]IPR011012Longin-like domain superfamilyHomologous Superfamily
B [auth S]IPR000804Clathrin adaptor complex, small chainConserved Site
B [auth S]IPR022775AP complex, mu/sigma subunitDomain
B [auth S]IPR027156AP-2 complex subunit sigmaFamily
C [auth N]IPR001558HIV negative factor NefFamily
C [auth N]IPR027481HIV-1 Nef protein, core domain superfamilyHomologous Superfamily
C [auth N]IPR027480HIV-1 Nef protein, anchor domain superfamilyHomologous Superfamily
D [auth B]IPR016024Armadillo-type foldHomologous Superfamily
D [auth B]IPR013037Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomainHomologous Superfamily
D [auth B]IPR000225ArmadilloRepeat
D [auth B]IPR026739AP complex subunit betaFamily
D [auth B]IPR011989Armadillo-like helicalHomologous Superfamily
D [auth B]IPR012295TBP domain superfamilyHomologous Superfamily
D [auth B]IPR002553Clathrin/coatomer adaptor, adaptin-like, N-terminalDomain
D [auth B]IPR015151Beta-adaptin appendage, C-terminal subdomainDomain
D [auth B]IPR013041Clathrin adaptor, appendage, Ig-like subdomain superfamilyHomologous Superfamily
D [auth B]IPR008152Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainDomain
D [auth B]IPR009028Coatomer/calthrin adaptor appendage, C-terminal subdomainHomologous Superfamily
D [auth B]IPR016342AP-1/2/4 complex subunit betaFamily
E [auth M]IPR043512Mu2, C-terminal domainDomain
E [auth M]IPR050431Adaptor complexes medium subunitFamily
E [auth M]IPR036168AP-2 complex subunit mu, C-terminal superfamilyHomologous Superfamily
E [auth M]IPR028565Mu homology domainDomain
E [auth M]IPR018240Clathrin adaptor, mu subunit, conserved siteConserved Site
E [auth M]IPR001392Clathrin adaptor, mu subunitFamily
E [auth M]IPR011012Longin-like domain superfamilyHomologous Superfamily
E [auth M]IPR043532AP-2 complex subunit mu, N-terminalDomain
E [auth M]IPR022775AP complex, mu/sigma subunitDomain
F [auth D]IPR021963T cell CD4 receptor C-terminal regionDomain
F [auth D]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
F [auth D]IPR013106Immunoglobulin V-set domainDomain
F [auth D]IPR000973T-cell surface antigen CD4Family
F [auth D]IPR003599Immunoglobulin domain subtypeDomain
F [auth D]IPR008424Immunoglobulin C2-setDomain
F [auth D]IPR013151Immunoglobulin-like beta-sandwich domainDomain
F [auth D]IPR015274CD4, extracellularDomain
F [auth D]IPR013783Immunoglobulin-like foldHomologous Superfamily
F [auth D]IPR007110Immunoglobulin-like domainDomain
F [auth D]IPR003598Immunoglobulin subtype 2Domain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth S]PharosP53680
D [auth B]PharosP63010
E [auth M]PharosQ96CW1
F [auth D]PharosP01730