6H8O
Crystal structure of the Master-Rep protein nuclease domain from the Faba Bean Necrotic Yellows Virus
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Viral_Rep | e6h8oA1 | A: a+b two layers | X: Alpha-beta plaits | H: Origin of replication-binding domains | T: Origin of replication-binding domains | F: Viral_Rep | ECOD (1.6) |
B | Viral_Rep | e6h8oB1 | A: a+b two layers | X: Alpha-beta plaits | H: Origin of replication-binding domains | T: Origin of replication-binding domains | F: Viral_Rep | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.1310.20 | Alpha Beta | 3-Layer(aba) Sandwich | Replication Protein E1 | Chain: A, | CATH (4.3.0) |
B | 3.40.1310.20 | Alpha Beta | 3-Layer(aba) Sandwich | Replication Protein E1 | Chain: A, | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02407 | Putative viral replication protein (Viral_Rep) | Putative viral replication protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR049912 | CRESS-DNA virus replication initiator protein, endonuclease domain | Domain | |
IPR000605 | Helicase, superfamily 3, single-stranded DNA/RNA virus | Domain |