5NBQ
The structure of the tripartite complex between OspE, the C-terminal domains of factor H and C3dg
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d5nbqb_ | All alpha proteins | alpha/alpha toroid | Terpenoid cyclases/Protein prenyltransferases | Complement components | Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d5nbqc_ | All alpha proteins | alpha/alpha toroid | Terpenoid cyclases/Protein prenyltransferases | Complement components | Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d5nbqa_ | All alpha proteins | alpha/alpha toroid | Terpenoid cyclases/Protein prenyltransferases | Complement components | Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Terpenoid cyclases/Protein prenyltransferases | 8038414 | 3001024 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Terpenoid cyclases/Protein prenyltransferases | 8038414 | 3001024 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Terpenoid cyclases/Protein prenyltransferases | 8038414 | 3001024 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | PF00084 | e5nbqD2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
E | PF00084 | e5nbqE1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
F | PF00084 | e5nbqF1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
G | PF02471 | e5nbqG1 | A: a+b two layers | X: ssDNA-binding transcriptional regulator domain-like | H: Outer surface protein E (From Topology) | T: Outer surface protein E | F: PF02471 | ECOD (1.6) |
I | PF02471 | e5nbqI1 | A: a+b two layers | X: ssDNA-binding transcriptional regulator domain-like | H: Outer surface protein E (From Topology) | T: Outer surface protein E | F: PF02471 | ECOD (1.6) |
B | PF07678 | e5nbqB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: PF07678 | ECOD (1.6) |
C | PF07678 | e5nbqC1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: PF07678 | ECOD (1.6) |
A | PF07678 | e5nbqA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: PF07678 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
D | 2.10.70.10 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (4.3.0) |
E | 2.10.70.10 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (4.3.0) |
F | 2.10.70.10 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (4.3.0) |
G | 2.30.31.50 | Mainly Beta | Roll | Transcriptional Co-activator pc4 | Chain A | CATH (4.3.0) |
I | 2.30.31.50 | Mainly Beta | Roll | Transcriptional Co-activator pc4 | Chain A | CATH (4.3.0) |
B | 1.50.10.20 | Mainly Alpha | Alpha/alpha barrel | Glycosyltransferase | CATH (4.3.0) | |
C | 1.50.10.20 | Mainly Alpha | Alpha/alpha barrel | Glycosyltransferase | CATH (4.3.0) | |
A | 1.50.10.20 | Mainly Alpha | Alpha/alpha barrel | Glycosyltransferase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00084 | Sushi repeat (SCR repeat) (Sushi) | Sushi repeat (SCR repeat) | - | Domain | |
PF02471 | Borrelia outer surface protein E (OspE) | Borrelia outer surface protein E | - | Family | |
PF07678 | A-macroglobulin TED domain (TED_complement) | A-macroglobulin TED domain | - | Repeat |