The structure of the tripartite complex between OspE, the C-terminal domains of factor H and C3dg
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d5nbqa_ | All alpha proteins | alpha/alpha toroid | Terpenoid cyclases/Protein prenyltransferases | Complement components | Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| B | d5nbqb_ | All alpha proteins | alpha/alpha toroid | Terpenoid cyclases/Protein prenyltransferases | Complement components | Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| C | d5nbqc_ | All alpha proteins | alpha/alpha toroid | Terpenoid cyclases/Protein prenyltransferases | Complement components | Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | Terpenoid cyclases/Protein prenyltransferases | 8038414 | 3001024 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Terpenoid cyclases/Protein prenyltransferases | 8038414 | 3001024 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Terpenoid cyclases/Protein prenyltransferases | 8038414 | 3001024 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | ATP-synt_Eps | e5nbqA1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: ATP-synt_Eps | ECOD (v294.1) |
| B | GFP | e5nbqB1 | A: a/b three-layered sandwiches | X: Protein kinase/SAICAR synthase/ATP-grasp | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Undecaprenyl diphosphate synthase | F: GFP | ECOD (v294.1) |
| C | ATP-synt_Eps | e5nbqC1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: ATP-synt_Eps | ECOD (v294.1) |
| D | GFP | e5nbqD1 | A: a/b three-layered sandwiches | X: Protein kinase/SAICAR synthase/ATP-grasp | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Undecaprenyl diphosphate synthase | F: GFP | ECOD (v294.1) |
| E | ATP-synt_Eps | e5nbqE1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: ATP-synt_Eps | ECOD (v294.1) |
| F | ATP-synt_Eps | e5nbqF1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: ATP-synt_Eps | ECOD (v294.1) |
| H | Serpin | e5nbqH01 | A: a/b three-layered sandwiches | X: Rossmann-like | H: P-loop domains-related | T: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | F: Serpin | ECOD (v294.1) |
| G | GFP | e5nbqG1 | A: a/b three-layered sandwiches | X: Protein kinase/SAICAR synthase/ATP-grasp | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Undecaprenyl diphosphate synthase | F: GFP | ECOD (v294.1) |
| I | ATP-synt_Eps | e5nbqI1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II | H: Rubredoxin-related | T: Tetrapyrrole methylase C-terminal domain | F: ATP-synt_Eps | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.50.10.20 | Mainly Alpha | Alpha/alpha barrel | Glycosyltransferase | CATH (4.3.0) | |
| B | 1.50.10.20 | Mainly Alpha | Alpha/alpha barrel | Glycosyltransferase | CATH (4.3.0) | |
| C | 1.50.10.20 | Mainly Alpha | Alpha/alpha barrel | Glycosyltransferase | CATH (4.3.0) | |
| D | 2.10.70.10 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (4.3.0) |
| E | 2.10.70.10 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (4.3.0) |
| F | 2.10.70.10 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (4.3.0) |
| G | 2.30.31.50 | Mainly Beta | Roll | Transcriptional Co-activator pc4 | Chain A | CATH (4.3.0) |
| I | 2.30.31.50 | Mainly Beta | Roll | Transcriptional Co-activator pc4 | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF07678 | A-macroglobulin TED domain (TED_complement) | A-macroglobulin TED domain | - | Repeat | |
| PF00084 | Sushi repeat (SCR repeat) (Sushi) | Sushi repeat (SCR repeat) | Domain | ||














