5LER

Structure of the bacterial sex F pilus (13.2 Angstrom rise)

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
DA [auth 2O]	TraA	e5ler2O1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
E [auth 1E]	TraA	e5ler1E1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
GA [auth 3C]	TraA	e5ler3C1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
HB [auth 4O]	TraA	e5ler4O1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
IA [auth 3E]	TraA	e5ler3E1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
K [auth 1K]	TraA	e5ler1K1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
KA [auth 3G]	TraA	e5ler3G1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
LA [auth 3H]	TraA	e5ler3H1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
LB [auth 5D]	TraA	e5ler5D1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
N [auth 1N]	TraA	e5ler1N1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
NA [auth 3J]	TraA	e5ler3J1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
P [auth 2A]	TraA	e5ler2A1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
Q [auth 2B]	TraA	e5ler2B1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
QB [auth 5I]	TraA	e5ler5I1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
S [auth 2D]	TraA	e5ler2D1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
SA [auth 3O]	TraA	e5ler3O1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
SB [auth 5K]	TraA	e5ler5K1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
VB [auth 5N]	TraA	e5ler5N1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
WB [auth 5O]	TraA	e5ler5O1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
YA [auth 4F]	TraA	e5ler4F1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
ZA [auth 4G]	TraA	e5ler4G1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
A [auth 1A]	TraA	e5ler1A1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
AA [auth 2L]	TraA	e5ler2L1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
AB [auth 4H]	TraA	e5ler4H1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
B [auth 1B]	TraA	e5ler1B1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
BA [auth 2M]	TraA	e5ler2M1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
BB [auth 4I]	TraA	e5ler4I1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
C [auth 1C]	TraA	e5ler1C1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
CA [auth 2N]	TraA	e5ler2N1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
CB [auth 4J]	TraA	e5ler4J1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
D [auth 1D]	TraA	e5ler1D1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
DB [auth 4K]	TraA	e5ler4K1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
EA [auth 3A]	TraA	e5ler3A1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
EB [auth 4L]	TraA	e5ler4L1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
F [auth 1F]	TraA	e5ler1F1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
FA [auth 3B]	TraA	e5ler3B1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
FB [auth 4M]	TraA	e5ler4M1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
G [auth 1G]	TraA	e5ler1G1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
GB [auth 4N]	TraA	e5ler4N1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
H [auth 1H]	TraA	e5ler1H1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
HA [auth 3D]	TraA	e5ler3D1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
I [auth 1I]	TraA	e5ler1I1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
IB [auth 5A]	TraA	e5ler5A1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
J [auth 1J]	TraA	e5ler1J1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
JA [auth 3F]	TraA	e5ler3F1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
JB [auth 5B]	TraA	e5ler5B1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
KB [auth 5C]	TraA	e5ler5C1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
L [auth 1L]	TraA	e5ler1L1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
M [auth 1M]	TraA	e5ler1M1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
MA [auth 3I]	TraA	e5ler3I1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
MB [auth 5E]	TraA	e5ler5E1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
NB [auth 5F]	TraA	e5ler5F1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
O [auth 1O]	TraA	e5ler1O1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
OA [auth 3K]	TraA	e5ler3K1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
OB [auth 5G]	TraA	e5ler5G1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
PA [auth 3L]	TraA	e5ler3L1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
PB [auth 5H]	TraA	e5ler5H1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
QA [auth 3M]	TraA	e5ler3M1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
R [auth 2C]	TraA	e5ler2C1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
RA [auth 3N]	TraA	e5ler3N1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
RB [auth 5J]	TraA	e5ler5J1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
T [auth 2E]	TraA	e5ler2E1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
TA [auth 4A]	TraA	e5ler4A1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
TB [auth 5L]	TraA	e5ler5L1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
U [auth 2F]	TraA	e5ler2F1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
UA [auth 4B]	TraA	e5ler4B1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
UB [auth 5M]	TraA	e5ler5M1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
V [auth 2G]	TraA	e5ler2G1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
VA [auth 4C]	TraA	e5ler4C1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
W [auth 2H]	TraA	e5ler2H1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
WA [auth 4D]	TraA	e5ler4D1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
X [auth 2I]	TraA	e5ler2I1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
XA [auth 4E]	TraA	e5ler4E1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
Y [auth 2J]	TraA	e5ler2J1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)
Z [auth 2K]	TraA	e5ler2K1	A: alpha bundles	X: Pilin (From Topology)	H: Pilin (From Topology)	T: Pilin	F: TraA	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth 1A], AA [auth 2L], AB [auth 4H], B [auth 1B], BA [auth 2M], A [auth 1A], AA [auth 2L], AB [auth 4H], B [auth 1B], BA [auth 2M], BB [auth 4I], C [auth 1C], CA [auth 2N], CB [auth 4J], D [auth 1D], DA [auth 2O], DB [auth 4K], E [auth 1E], EA [auth 3A], EB [auth 4L], F [auth 1F], FA [auth 3B], FB [auth 4M], G [auth 1G], GA [auth 3C], GB [auth 4N], H [auth 1H], HA [auth 3D], HB [auth 4O], I [auth 1I], IA [auth 3E], IB [auth 5A], J [auth 1J], JA [auth 3F], JB [auth 5B], K [auth 1K], KA [auth 3G], KB [auth 5C], L [auth 1L], LA [auth 3H], LB [auth 5D], M [auth 1M], MA [auth 3I], MB [auth 5E], N [auth 1N], NA [auth 3J], NB [auth 5F], O [auth 1O], OA [auth 3K], OB [auth 5G], P [auth 2A], PA [auth 3L], PB [auth 5H], Q [auth 2B], QA [auth 3M], QB [auth 5I], R [auth 2C], RA [auth 3N], RB [auth 5J], S [auth 2D], SA [auth 3O], SB [auth 5K], T [auth 2E], TA [auth 4A], TB [auth 5L], U [auth 2F], UA [auth 4B], UB [auth 5M], V [auth 2G], VA [auth 4C], VB [auth 5N], W [auth 2H], WA [auth 4D], WB [auth 5O], X [auth 2I], XA [auth 4E], Y [auth 2J], YA [auth 4F], Z [auth 2K], ZA [auth 4G]	PF05513	TraA (TraA)	TraA	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 1A], AA [auth 2L], AB [auth 4H], B [auth 1B], BA [auth 2M], A [auth 1A], AA [auth 2L], AB [auth 4H], B [auth 1B], BA [auth 2M], BB [auth 4I], C [auth 1C], CA [auth 2N], CB [auth 4J], D [auth 1D], DA [auth 2O], DB [auth 4K], E [auth 1E], EA [auth 3A], EB [auth 4L], F [auth 1F], FA [auth 3B], FB [auth 4M], G [auth 1G], GA [auth 3C], GB [auth 4N], H [auth 1H], HA [auth 3D], HB [auth 4O], I [auth 1I], IA [auth 3E], IB [auth 5A], J [auth 1J], JA [auth 3F], JB [auth 5B], K [auth 1K], KA [auth 3G], KB [auth 5C], L [auth 1L], LA [auth 3H], LB [auth 5D], M [auth 1M], MA [auth 3I], MB [auth 5E], N [auth 1N], NA [auth 3J], NB [auth 5F], O [auth 1O], OA [auth 3K], OB [auth 5G], P [auth 2A], PA [auth 3L], PB [auth 5H], Q [auth 2B], QA [auth 3M], QB [auth 5I], R [auth 2C], RA [auth 3N], RB [auth 5J], S [auth 2D], SA [auth 3O], SB [auth 5K], T [auth 2E], TA [auth 4A], TB [auth 5L], U [auth 2F], UA [auth 4B], UB [auth 5M], V [auth 2G], VA [auth 4C], VB [auth 5N], W [auth 2H], WA [auth 4D], WB [auth 5O], X [auth 2I], XA [auth 4E], Y [auth 2J], YA [auth 4F], Z [auth 2K], ZA [auth 4G]	Pilin	-	-	cell periphery plasma membrane membrane cellular anatomical entity extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 1A], AA [auth 2L], AB [auth 4H], B [auth 1B], BA [auth 2M], A [auth 1A], AA [auth 2L], AB [auth 4H], B [auth 1B], BA [auth 2M], BB [auth 4I], C [auth 1C], CA [auth 2N], CB [auth 4J], D [auth 1D], DA [auth 2O], DB [auth 4K], E [auth 1E], EA [auth 3A], EB [auth 4L], F [auth 1F], FA [auth 3B], FB [auth 4M], G [auth 1G], GA [auth 3C], GB [auth 4N], H [auth 1H], HA [auth 3D], HB [auth 4O], I [auth 1I], IA [auth 3E], IB [auth 5A], J [auth 1J], JA [auth 3F], JB [auth 5B], K [auth 1K], KA [auth 3G], KB [auth 5C], L [auth 1L], LA [auth 3H], LB [auth 5D], M [auth 1M], MA [auth 3I], MB [auth 5E], N [auth 1N], NA [auth 3J], NB [auth 5F], O [auth 1O], OA [auth 3K], OB [auth 5G], P [auth 2A], PA [auth 3L], PB [auth 5H], Q [auth 2B], QA [auth 3M], QB [auth 5I], R [auth 2C], RA [auth 3N], RB [auth 5J], S [auth 2D], SA [auth 3O], SB [auth 5K], T [auth 2E], TA [auth 4A], TB [auth 5L], U [auth 2F], UA [auth 4B], UB [auth 5M], V [auth 2G], VA [auth 4C], VB [auth 5N], W [auth 2H], WA [auth 4D], WB [auth 5O], X [auth 2I], XA [auth 4E], Y [auth 2J], YA [auth 4F], Z [auth 2K], ZA [auth 4G]	IPR008873	TraA	Family