4FA8
Multi-pronged modulation of cytokine signaling
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D [auth E] | d4fa8e1 | All alpha proteins | 4-helical cytokines | 4-helical cytokines | Short-chain cytokines | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D [auth E] | d4fa8e2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
E [auth F] | d4fa8f1 | All alpha proteins | 4-helical cytokines | 4-helical cytokines | Short-chain cytokines | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
E [auth F] | d4fa8f2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
F [auth G] | d4fa8g1 | All alpha proteins | 4-helical cytokines | 4-helical cytokines | Short-chain cytokines | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
F [auth G] | d4fa8g2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D [auth E] | SCOP2B Superfamily | 4-helical cytokines | 8037095 | 3001717 | SCOP2B (2022-06-29) |
E [auth F] | SCOP2B Superfamily | 4-helical cytokines | 8037095 | 3001717 | SCOP2B (2022-06-29) |
F [auth G] | SCOP2B Superfamily | 4-helical cytokines | 8037095 | 3001717 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | V-set_15 | e4fa8A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_15 | ECOD (1.6) |
A | PHA03376 | e4fa8A2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PHA03376 | ECOD (1.6) |
B | V-set_15 | e4fa8B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_15 | ECOD (1.6) |
B | PHA03376 | e4fa8B2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PHA03376 | ECOD (1.6) |
C [auth D] | V-set_15 | e4fa8D1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_15 | ECOD (1.6) |
C [auth D] | PHA03376 | e4fa8D2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PHA03376 | ECOD (1.6) |
D [auth E] | CSF-1 | e4fa8E1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: CSF-1 | ECOD (1.6) |
E [auth F] | CSF-1 | e4fa8F1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: CSF-1 | ECOD (1.6) |
F [auth G] | CSF-1 | e4fa8G1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: CSF-1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C [auth D] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
D [auth E] | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
E [auth F] | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
F [auth G] | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
A, B, C [auth D] | Secreted protein BARF1 | 1V-1C-LIKE | Homo sapiens (human) | BARF1 | V-LIKE-DOMAIN V-LIKE, C-LIKE-DOMAIN C-LIKE | RPI | 1V-1C-LIKE | IMGT (202436-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B, C [auth D] | PF22305 | BARF1 second Ig-like domain (BARF1_ig2) | BARF1 second Ig-like domain | This entry represents the second Immunoglobulin-like domain present in the BARF1 protein from Epstein-Barr virus [1,2,3]. | Domain |
D [auth E], E [auth F], F [auth G] | PF05337 | Macrophage colony stimulating factor-1 (CSF-1) (CSF-1) | Macrophage colony stimulating factor-1 (CSF-1) | Colony stimulating factor 1 (CSF-1) is a homodimeric polypeptide growth factor whose primary function is to regulate the survival, proliferation, differentiation, and function of cells of the mononuclear phagocytic lineage. This lineage includes mono ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B, C [auth D] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
A, B, C [auth D] | IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily |
A, B, C [auth D] | IPR007110 | Immunoglobulin-like domain | Domain |
D [auth E], E [auth F], F [auth G] | IPR008001 | Macrophage colony stimulating factor-1 | Family |
D [auth E], E [auth F], F [auth G] | IPR009079 | Four-helical cytokine-like, core | Homologous Superfamily |