Annotations: 3PG6

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF18102	e3pg6A1	A: a+b two layers	X: Carboxyl terminal domain of human deltex 3-like (From Topology)	H: Carboxyl terminal domain of human deltex 3-like (From Topology)	T: Carboxyl terminal domain of human deltex 3-like	F: PF18102	ECOD (1.6)
B	PF18102	e3pg6B1	A: a+b two layers	X: Carboxyl terminal domain of human deltex 3-like (From Topology)	H: Carboxyl terminal domain of human deltex 3-like (From Topology)	T: Carboxyl terminal domain of human deltex 3-like	F: PF18102	ECOD (1.6)
C	PF18102	e3pg6C1	A: a+b two layers	X: Carboxyl terminal domain of human deltex 3-like (From Topology)	H: Carboxyl terminal domain of human deltex 3-like (From Topology)	T: Carboxyl terminal domain of human deltex 3-like	F: PF18102	ECOD (1.6)
D	PF18102	e3pg6D1	A: a+b two layers	X: Carboxyl terminal domain of human deltex 3-like (From Topology)	H: Carboxyl terminal domain of human deltex 3-like (From Topology)	T: Carboxyl terminal domain of human deltex 3-like	F: PF18102	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.390.130	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
B	3.30.390.130	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
C	3.30.390.130	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
D	3.30.390.130	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF18102	Deltex C-terminal domain (DTC)	Deltex C-terminal domain	This is the C-terminal domains found in members of the Deltex family of proteins which comprises five members (DTX1, 2, 3, 4, and 3L). This conserved C-terminal region of about 150 residues of the Deltex family, is preceded by a RING E3 ligase domain ...	This is the C-terminal domains found in members of the Deltex family of proteins which comprises five members (DTX1, 2, 3, 4, and 3L). This conserved C-terminal region of about 150 residues of the Deltex family, is preceded by a RING E3 ligase domain in four of the members. Crystal structure of the Deltex C-terminal (DTC) domain reveals a fold composed of a central beta-sheet lined with two long parallel alpha-helices [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	E3 ubiquitin-protein ligase DTX3L	protein binding binding histone binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding DNA-binding transcription factor binding STAT family protein binding enzyme regulator activity molecular function inhibitor activity molecular function regulator activity enzyme inhibitor activity aminoacyltransferase activity catalytic activity, acting on a protein acyltransferase activity protein binding binding histone binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding DNA-binding transcription factor binding STAT family protein binding enzyme regulator activity molecular function inhibitor activity molecular function regulator activity enzyme inhibitor activity aminoacyltransferase activity catalytic activity, acting on a protein acyltransferase activity transferase activity histone ubiquitin ligase activity ubiquitin-protein transferase activity ubiquitin-like protein transferase activity histone H4K91 ubiquitin ligase activity histone H4 ubiquitin ligase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity histone modifying activity catalytic activity ubiquitin-like protein ligase binding enzyme binding protein ADP-ribosyltransferase-substrate adaptor activity enzyme-substrate adaptor activity protein-macromolecule adaptor activity molecular adaptor activity cation binding ion binding metal ion binding small molecule binding	protein localization regulation of localization regulation of biological process cellular localization regulation of cellular process regulation of protein localization positive regulation of protein localization to nucleus biological regulation positive regulation of biological process regulation of protein localization to nucleus protein localization to nucleus localization regulation of cellular localization cellular macromolecule localization macromolecule localization protein localization regulation of localization regulation of biological process cellular localization regulation of cellular process regulation of protein localization positive regulation of protein localization to nucleus biological regulation positive regulation of biological process regulation of protein localization to nucleus protein localization to nucleus localization regulation of cellular localization cellular macromolecule localization macromolecule localization protein localization to organelle positive regulation of protein localization cellular process positive regulation of cellular process transport endosome to lysosome transport intracellular transport lysosomal transport establishment of localization vesicle-mediated transport establishment of localization in cell vacuolar transport cellular response to stimulus DNA repair-dependent chromatin remodeling response to stimulus protein-containing complex organization protein-DNA complex organization cellular component organization cellular response to stress DNA damage response chromatin organization response to stress chromatin remodeling cellular component organization or biogenesis establishment of protein localization nitrogen compound transport organic substance transport protein transport biological process involved in interspecies interaction between organisms immune response response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus immune system process defense response to other organism innate immune response response to external biotic stimulus organonitrogen compound metabolic process protein autoubiquitination primary metabolic process organic substance metabolic process protein ubiquitination macromolecule modification metabolic process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal positive regulation of protein localization to early endosome protein localization to endosome protein localization to early endosome regulation of protein localization to endosome positive regulation of protein localization to endosome regulation of protein localization to early endosome receptor catabolic process catabolic process positive regulation of cellular metabolic process macromolecule catabolic process cellular catabolic process positive regulation of metabolic process receptor metabolic process positive regulation of macromolecule metabolic process positive regulation of receptor catabolic process cellular metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process regulation of catabolic process positive regulation of catabolic process regulation of receptor catabolic process regulation of cellular catabolic process positive regulation of cellular catabolic process organic substance catabolic process regulation of metabolic process organonitrogen compound catabolic process proteolysis involved in protein catabolic process protein catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis ubiquitin-dependent protein catabolic process protein polyubiquitination protein K48-linked ubiquitination positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process DNA-templated transcription regulation of RNA metabolic process organic substance biosynthetic process regulation of nucleobase-containing compound metabolic process positive regulation of nucleobase-containing compound metabolic process positive regulation of RNA metabolic process organic cyclic compound metabolic process regulation of gene expression biosynthetic process organic cyclic compound biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription positive regulation of DNA-templated transcription cellular biosynthetic process RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of biosynthetic process regulation of RNA biosynthetic process regulation of biosynthetic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process positive regulation of RNA biosynthetic process positive regulation of cellular biosynthetic process regulation of defense response regulation of response to biotic stimulus regulation of response to external stimulus regulation of defense response to virus defense response to virus regulation of response to stimulus regulation of response to stress positive regulation of defense response to virus by host regulation of defense response to virus by host response to virus double-strand break repair DNA metabolic process DNA repair negative regulation of post-translational protein modification regulation of protein modification process regulation of catalytic activity negative regulation of biological process regulation of protein ubiquitination negative regulation of catalytic activity regulation of transferase activity negative regulation of ubiquitin-protein transferase activity negative regulation of transferase activity negative regulation of protein modification process regulation of ubiquitin-protein transferase activity negative regulation of protein ubiquitination regulation of protein modification by small protein conjugation or removal negative regulation of protein metabolic process negative regulation of macromolecule metabolic process negative regulation of protein modification by small protein conjugation or removal regulation of post-translational protein modification regulation of protein metabolic process negative regulation of metabolic process negative regulation of molecular function regulation of molecular function cell surface receptor signaling pathway signaling cell communication Notch signaling pathway signal transduction DNA damage checkpoint signaling regulation of cell cycle phase transition negative regulation of cell cycle cell cycle phase transition intracellular signal transduction negative regulation of cellular process negative regulation of cell cycle phase transition cell cycle regulation of cell cycle cell cycle process regulation of cell cycle process DNA integrity checkpoint signaling negative regulation of cell cycle process cell cycle checkpoint signaling signal transduction in response to DNA damage positive regulation of chromatin binding positive regulation of molecular function regulation of binding regulation of chromatin binding positive regulation of binding regulation of protein binding positive regulation of protein binding	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen lytic vacuole vacuole lysosome protein-containing complex vacuolar membrane membrane lytic vacuole membrane bounding membrane of organelle lysosomal membrane organelle membrane endosome membrane early endosome endosome intracellular vesicle early endosome membrane endomembrane system cytoplasmic vesicle membrane cytoplasmic vesicle vesicle membrane vesicle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR017907	Zinc finger, RING-type, conserved site	Conserved Site
A, B, C, D	IPR048418	DTX3L, alpha/beta domain	Domain
A, B, C, D	IPR048409	DTX3L, KH-like domain	Domain
A, B, C, D	IPR039396	Deltex, C-terminal	Domain
A, B, C, D	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
A, B, C, D	IPR039399	Deltex, C-terminal domain superfamily	Homologous Superfamily
A, B, C, D	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
A, B, C, D	IPR042843	DTX3L, RING-HC finger	Domain
A, B, C, D	IPR001841	Zinc finger, RING-type	Domain
A, B, C, D	IPR039398	Deltex family	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D	Pharos: Q8TDB6	astrocytic tumor glioblastoma malignant glioma multiple sclerosis pancreatic ductal adenocarcinoma psoriasis breast cancer juvenile dermatomyositis Malignant neoplasm of breast oligodendroglioma pancreatic intraductal papillary-mucinous neoplasm Sjogren syndrome Crohn disease malignant ependymoma medulloblastoma astrocytic tumor glioblastoma malignant glioma multiple sclerosis pancreatic ductal adenocarcinoma psoriasis breast cancer juvenile dermatomyositis Malignant neoplasm of breast oligodendroglioma pancreatic intraductal papillary-mucinous neoplasm Sjogren syndrome Crohn disease malignant ependymoma medulloblastoma ovarian cancer pilocytic astrocytoma subependymal giant cell astrocytoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.