3NDZ
The structure of the catalytic and carbohydrate binding domain of endoglucanase D from Clostridium cellulovorans bound to cellotriose
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | (Trans)glycosidases | 8078105 | 3000313 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | (Trans)glycosidases | 8078105 | 3000313 | SCOP2B (2022-06-29) |
E [auth C] | SCOP2B Superfamily | (Trans)glycosidases | 8078105 | 3000313 | SCOP2B (2022-06-29) |
G [auth D] | SCOP2B Superfamily | (Trans)glycosidases | 8078105 | 3000313 | SCOP2B (2022-06-29) |
B [auth E] | SCOP2B Superfamily | Carbohydrate-binding domain | 8073523 | 3000706 | SCOP2B (2022-06-29) |
D [auth F] | SCOP2B Superfamily | Carbohydrate-binding domain | 8073523 | 3000706 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Carbohydrate-binding domain | 8073523 | 3000706 | SCOP2B (2022-06-29) |
F [auth G] | SCOP2B Superfamily | Carbohydrate-binding domain | 8073523 | 3000706 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Cellulase | e3ndzA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Cellulase | ECOD (1.6) |
C [auth B] | Cellulase | e3ndzB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Cellulase | ECOD (1.6) |
E [auth C] | Cellulase | e3ndzC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Cellulase | ECOD (1.6) |
G [auth D] | Cellulase | e3ndzD1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Cellulase | ECOD (1.6) |
B [auth E] | CBM_2 | e3ndzE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: CBM_2 | ECOD (1.6) |
D [auth F] | CBM_2 | e3ndzF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: CBM_2 | ECOD (1.6) |
H | CBM_2 | e3ndzH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: CBM_2 | ECOD (1.6) |
F [auth G] | CBM_2 | e3ndzG1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: CBM_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
C [auth B] | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
E [auth C] | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
G [auth D] | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
B [auth E] | 2.60.40.290 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
D [auth F] | 2.60.40.290 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
H | 2.60.40.290 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
F [auth G] | 2.60.40.290 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B], E [auth C], G [auth D] | PF00150 | Cellulase (glycosyl hydrolase family 5) (Cellulase) | Cellulase (glycosyl hydrolase family 5) | - | Domain |
B [auth E], D [auth F], F [auth G], H | PF00553 | Cellulose binding domain (CBM_2) | Cellulose binding domain | Two tryptophan residues are involved in cellulose binding. Cellulose binding domain found in bacteria. | Domain |