3HQV
Low resolution, molecular envelope structure of type I collagen in situ determined by fiber diffraction. Single type I collagen molecule, rigid body refinement
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3hqva_ | Low resolution protein structures | Collagen fibre | Collagen fibre | Collagen fibre | Collagen I alpha | (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
C | d3hqvc_ | Low resolution protein structures | Collagen fibre | Collagen fibre | Collagen fibre | Collagen I alpha | (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
B | d3hqvb_ | Low resolution protein structures | Collagen fibre | Collagen fibre | Collagen fibre | Collagen I alpha | (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01391 | Collagen triple helix repeat (20 copies) (Collagen) | Collagen triple helix repeat (20 copies) | - | Repeat | |
PF01391 | Collagen triple helix repeat (20 copies) (Collagen) | Collagen triple helix repeat (20 copies) | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008160 | Collagen triple helix repeat | Repeat | |
IPR000885 | Fibrillar collagen, C-terminal | Domain | |
IPR001007 | VWFC domain | Domain | |
IPR050149 | Collagen superfamily | Family | |
IPR008160 | Collagen triple helix repeat | Repeat | |
IPR000885 | Fibrillar collagen, C-terminal | Domain | |
IPR050149 | Collagen superfamily | Family |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
HYP | Parent Component: PRO :  AA0030 :  4-hydroxy-L-proline MOD:00039 | |
LYZ | Parent Component: LYS :  AA0030 , AA0028 :  4-hydroxy-L-proline MOD:00039 , 5-hydroxy-L-lysine MOD:00037 | |
HYP | Parent Component: PRO :  AA0030 , AA0028 , AA0030 :  4-hydroxy-L-proline MOD:00039 , 5-hydroxy-L-lysine MOD:00037 , 4-hydroxy-L-proline MOD:00039 | |
LYZ | Parent Component: LYS :  AA0030 , AA0028 , AA0030 , AA0028 :  4-hydroxy-L-proline MOD:00039 , 5-hydroxy-L-lysine MOD:00037 , 4-hydroxy-L-proline MOD:00039 , 5-hydroxy-L-lysine MOD:00037 |