3EWK
Structure of the redox sensor domain of Methylococcus capsulatus (Bath) MmoS
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.450.20 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | PAS domain | CATH (4.3.0) |
A | 1.20.5.460 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Single helix bin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13426 | PAS domain (PAS_9) | PAS domain | This domain is found in many signalling proteins in which it functions as a sensor domain. It recognises FMN, Zn(II), FAD and riboflavin (MAtilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000014 | PAS domain | Domain | |
IPR011006 | CheY-like superfamily | Homologous Superfamily | |
IPR004358 | Signal transduction histidine kinase-related protein, C-terminal | Domain | |
IPR001789 | Signal transduction response regulator, receiver domain | Domain | |
IPR036097 | Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily | Homologous Superfamily | |
IPR036890 | Histidine kinase/HSP90-like ATPase superfamily | Homologous Superfamily | |
IPR003661 | Signal transduction histidine kinase, dimerisation/phosphoacceptor domain | Domain | |
IPR035965 | PAS domain superfamily | Homologous Superfamily | |
IPR001610 | PAC motif | Repeat | |
IPR003594 | Histidine kinase/HSP90-like ATPase domain | Domain | |
IPR000700 | PAS-associated, C-terminal | Domain | |
IPR005467 | Histidine kinase domain | Domain | |
IPR036641 | HPT domain superfamily | Homologous Superfamily | |
IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | Domain | |
IPR003018 | GAF domain | Domain | |
IPR029016 | GAF-like domain superfamily | Homologous Superfamily |