3BID
Crystal structure of the NMB1088 protein from Neisseria meningitidis. Northeast Structural Genomics Consortium target MR91
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | YegP-like | 8026883 | 4001754 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | YegP-like | 8039262 | 3000336 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | YegP-like | 8039262 | 3000336 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | YegP-like | 8039262 | 3000336 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | YegP-like | 8039262 | 3000336 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | YegP-like | 8039262 | 3000336 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | YegP-like | 8039262 | 3000336 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | YegP-like | 8039262 | 3000336 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | YegP-like | 8039262 | 3000336 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DUF1508_1 | e3bidA1 | A: mixed a+b and a/b | X: YegP-like (From Topology) | H: YegP-like (From Topology) | T: YegP-like | F: DUF1508_1 | ECOD (1.6) |
B | DUF1508_1 | e3bidB1 | A: mixed a+b and a/b | X: YegP-like (From Topology) | H: YegP-like (From Topology) | T: YegP-like | F: DUF1508_1 | ECOD (1.6) |
C | DUF1508_1 | e3bidC1 | A: mixed a+b and a/b | X: YegP-like (From Topology) | H: YegP-like (From Topology) | T: YegP-like | F: DUF1508_1 | ECOD (1.6) |
D | DUF1508_1 | e3bidD1 | A: mixed a+b and a/b | X: YegP-like (From Topology) | H: YegP-like (From Topology) | T: YegP-like | F: DUF1508_1 | ECOD (1.6) |
E | DUF1508_1 | e3bidE1 | A: mixed a+b and a/b | X: YegP-like (From Topology) | H: YegP-like (From Topology) | T: YegP-like | F: DUF1508_1 | ECOD (1.6) |
F | DUF1508_1 | e3bidF1 | A: mixed a+b and a/b | X: YegP-like (From Topology) | H: YegP-like (From Topology) | T: YegP-like | F: DUF1508_1 | ECOD (1.6) |
G | DUF1508_1 | e3bidG1 | A: mixed a+b and a/b | X: YegP-like (From Topology) | H: YegP-like (From Topology) | T: YegP-like | F: DUF1508_1 | ECOD (1.6) |
H | DUF1508_1 | e3bidH1 | A: mixed a+b and a/b | X: YegP-like (From Topology) | H: YegP-like (From Topology) | T: YegP-like | F: DUF1508_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.160.160 | Alpha Beta | 2-Layer Sandwich | Double Stranded RNA Binding Domain | YegP-like | CATH (4.3.0) |
B | 3.30.160.160 | Alpha Beta | 2-Layer Sandwich | Double Stranded RNA Binding Domain | YegP-like | CATH (4.3.0) |
C | 3.30.160.160 | Alpha Beta | 2-Layer Sandwich | Double Stranded RNA Binding Domain | YegP-like | CATH (4.3.0) |
D | 3.30.160.160 | Alpha Beta | 2-Layer Sandwich | Double Stranded RNA Binding Domain | YegP-like | CATH (4.3.0) |
E | 3.30.160.160 | Alpha Beta | 2-Layer Sandwich | Double Stranded RNA Binding Domain | YegP-like | CATH (4.3.0) |
F | 3.30.160.160 | Alpha Beta | 2-Layer Sandwich | Double Stranded RNA Binding Domain | YegP-like | CATH (4.3.0) |
G | 3.30.160.160 | Alpha Beta | 2-Layer Sandwich | Double Stranded RNA Binding Domain | YegP-like | CATH (4.3.0) |
H | 3.30.160.160 | Alpha Beta | 2-Layer Sandwich | Double Stranded RNA Binding Domain | YegP-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07411 | Domain of unknown function (DUF1508) (DUF1508) | Domain of unknown function (DUF1508) | This family represents a series of bacterial domains of unknown function of around 50 residues in length. Members of this family are often found as tandem repeats and in some cases represent the whole protein. All member proteins are described as bei ... | Domain |